Revert to using pandas based batched query, removing dask as a depend… #12
Workflow file for this run
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| name: integration tests | |
| on: | |
| push: | |
| branches: | |
| - main | |
| paths: | |
| - .pre-commit-config.yaml | |
| - .github/workflows/code_checks.yml | |
| - .github/workflows/docs_build.yml | |
| - .github/workflows/docs_deploy.yml | |
| - .github/workflows/integration_tests.yml | |
| - '**.py' | |
| - '**.ipynb' | |
| - poetry.lock | |
| - pyproject.toml | |
| - '**.rst' | |
| - '**.md' | |
| pull_request: | |
| branches: | |
| - main | |
| paths: | |
| - .pre-commit-config.yaml | |
| - .github/workflows/code_checks.yml | |
| - .github/workflows/docs_build.yml | |
| - .github/workflows/docs_deploy.yml | |
| - .github/workflows/integration_tests.yml | |
| - '**.py' | |
| - '**.ipynb' | |
| - poetry.lock | |
| - pyproject.toml | |
| - '**.rst' | |
| - '**.md' | |
| jobs: | |
| integration-tests: | |
| runs-on: [self-hosted, db] | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Install poetry | |
| run: pip install poetry | |
| - uses: actions/[email protected] | |
| with: | |
| python-version: '3.10' | |
| - name: Install dependencies and check code | |
| run: | | |
| poetry env use '3.10' | |
| source $(poetry env info --path)/bin/activate | |
| poetry install --with test | |
| coverage run -m pytest -m integration_test && coverage xml && coverage report -m | |
| - name: Upload coverage to Codecov | |
| uses: Wandalen/[email protected] | |
| with: | |
| action: codecov/[email protected] | |
| with: | | |
| token: ${{ secrets.CODECOV_TOKEN }} | |
| file: ./coverage.xml | |
| name: codecov-umbrella | |
| fail_ci_if_error: true | |
| attempt_limit: 5 | |
| attempt_delay: 30000 |