Skip to content

Commit

Permalink
deploy: 813bdee
Browse files Browse the repository at this point in the history
  • Loading branch information
@amrit110
amrit110 committed Nov 24, 2023
1 parent feed640 commit 55591cb
Show file tree
Hide file tree
Showing 9 changed files with 195 additions and 195 deletions.
2 changes: 1 addition & 1 deletion searchindex.js
View file

Large diffs are not rendered by default.

18 changes: 9 additions & 9 deletions tutorials/eicu.html
View file
Original file line number Diff line number Diff line change
Expand Up @@ -478,7 +478,7 @@ <h2>Imports and instantiate <code class="docutils literal notranslate"><span cla
</div>
<div class="output_area stderr docutils container">
<div class="highlight"><pre>
2023-11-23 22:37:47,310 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.orm - Database setup, ready to run queries!
2023-11-23 23:02:46,526 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.orm - Database setup, ready to run queries!
</pre></div></div>
</div>
<div class="nboutput nblast docutils container">
Expand Down Expand Up @@ -542,8 +542,8 @@ <h2>Example 1. Get all female patients discharged in 2014 (limit to 100 rows).<a
</div>
<div class="output_area stderr docutils container">
<div class="highlight"><pre>
2023-11-23 22:37:48,180 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.orm - Query returned successfully!
2023-11-23 22:37:48,181 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.utils.profile - Finished executing function run_query in 0.052660 s
2023-11-23 23:02:47,372 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.orm - Query returned successfully!
2023-11-23 23:02:47,373 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.utils.profile - Finished executing function run_query in 0.049122 s
</pre></div></div>
</div>
<div class="nboutput nblast docutils container">
Expand Down Expand Up @@ -578,8 +578,8 @@ <h2>Example 2. Get all patient encounters with diagnoses (<code class="docutils
</div>
<div class="output_area stderr docutils container">
<div class="highlight"><pre>
2023-11-23 22:37:48,281 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.orm - Query returned successfully!
2023-11-23 22:37:48,282 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.utils.profile - Finished executing function run_query in 0.080187 s
2023-11-23 23:02:47,470 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.orm - Query returned successfully!
2023-11-23 23:02:47,471 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.utils.profile - Finished executing function run_query in 0.076606 s
</pre></div></div>
</div>
<div class="nboutput nblast docutils container">
Expand Down Expand Up @@ -620,8 +620,8 @@ <h2>Example 3. Get potassium lab tests for patients discharged in the year 2014,
</div>
<div class="output_area stderr docutils container">
<div class="highlight"><pre>
2023-11-23 22:37:48,344 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.orm - Query returned successfully!
2023-11-23 22:37:48,346 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.utils.profile - Finished executing function run_query in 0.039138 s
2023-11-23 23:02:47,536 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.orm - Query returned successfully!
2023-11-23 23:02:47,537 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.utils.profile - Finished executing function run_query in 0.042015 s
</pre></div></div>
</div>
<div class="nboutput nblast docutils container">
Expand Down Expand Up @@ -660,8 +660,8 @@ <h2>Example 4. Get glucose medications (substring search) for female patients di
</div>
<div class="output_area stderr docutils container">
<div class="highlight"><pre>
2023-11-23 22:37:48,542 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.orm - Query returned successfully!
2023-11-23 22:37:48,543 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.utils.profile - Finished executing function run_query in 0.173201 s
2023-11-23 23:02:47,732 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.orm - Query returned successfully!
2023-11-23 23:02:47,734 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.utils.profile - Finished executing function run_query in 0.172433 s
</pre></div></div>
</div>
<div class="nboutput nblast docutils container">
Expand Down
58 changes: 29 additions & 29 deletions tutorials/eicu.ipynb
View file
Original file line number Diff line number Diff line change
Expand Up @@ -35,10 +35,10 @@
"id": "75a140e0-fb27-4319-862f-be54397abe5c",
"metadata": {
"execution": {
"iopub.execute_input": "2023-11-24T03:37:45.960929Z",
"iopub.status.busy": "2023-11-24T03:37:45.960436Z",
"iopub.status.idle": "2023-11-24T03:37:48.112756Z",
"shell.execute_reply": "2023-11-24T03:37:48.111242Z"
"iopub.execute_input": "2023-11-24T04:02:45.255676Z",
"iopub.status.busy": "2023-11-24T04:02:45.254871Z",
"iopub.status.idle": "2023-11-24T04:02:47.310521Z",
"shell.execute_reply": "2023-11-24T04:02:47.308493Z"
},
"tags": []
},
Expand All @@ -47,7 +47,7 @@
"name": "stderr",
"output_type": "stream",
"text": [
"2023-11-23 22:37:47,310 \u001b[1;37mINFO\u001b[0m cycquery.orm - Database setup, ready to run queries!\n"
"2023-11-23 23:02:46,526 \u001b[1;37mINFO\u001b[0m cycquery.orm - Database setup, ready to run queries!\n"
]
},
{
Expand Down Expand Up @@ -124,10 +124,10 @@
"id": "c1efa964-8978-4a0e-9892-5ea4ce9953a3",
"metadata": {
"execution": {
"iopub.execute_input": "2023-11-24T03:37:48.119689Z",
"iopub.status.busy": "2023-11-24T03:37:48.118927Z",
"iopub.status.idle": "2023-11-24T03:37:48.187108Z",
"shell.execute_reply": "2023-11-24T03:37:48.185534Z"
"iopub.execute_input": "2023-11-24T04:02:47.318608Z",
"iopub.status.busy": "2023-11-24T04:02:47.318001Z",
"iopub.status.idle": "2023-11-24T04:02:47.380018Z",
"shell.execute_reply": "2023-11-24T04:02:47.378439Z"
},
"tags": []
},
Expand All @@ -136,14 +136,14 @@
"name": "stderr",
"output_type": "stream",
"text": [
"2023-11-23 22:37:48,180 \u001b[1;37mINFO\u001b[0m cycquery.orm - Query returned successfully!\n"
"2023-11-23 23:02:47,372 \u001b[1;37mINFO\u001b[0m cycquery.orm - Query returned successfully!\n"
]
},
{
"name": "stderr",
"output_type": "stream",
"text": [
"2023-11-23 22:37:48,181 \u001b[1;37mINFO\u001b[0m cycquery.utils.profile - Finished executing function run_query in 0.052660 s\n"
"2023-11-23 23:02:47,373 \u001b[1;37mINFO\u001b[0m cycquery.utils.profile - Finished executing function run_query in 0.049122 s\n"
]
},
{
Expand Down Expand Up @@ -180,10 +180,10 @@
"id": "a7ab5fa3-e26b-47a7-818f-1bf367a55760",
"metadata": {
"execution": {
"iopub.execute_input": "2023-11-24T03:37:48.193117Z",
"iopub.status.busy": "2023-11-24T03:37:48.192679Z",
"iopub.status.idle": "2023-11-24T03:37:48.287590Z",
"shell.execute_reply": "2023-11-24T03:37:48.286710Z"
"iopub.execute_input": "2023-11-24T04:02:47.388281Z",
"iopub.status.busy": "2023-11-24T04:02:47.387707Z",
"iopub.status.idle": "2023-11-24T04:02:47.477725Z",
"shell.execute_reply": "2023-11-24T04:02:47.476146Z"
},
"tags": []
},
Expand All @@ -192,14 +192,14 @@
"name": "stderr",
"output_type": "stream",
"text": [
"2023-11-23 22:37:48,281 \u001b[1;37mINFO\u001b[0m cycquery.orm - Query returned successfully!\n"
"2023-11-23 23:02:47,470 \u001b[1;37mINFO\u001b[0m cycquery.orm - Query returned successfully!\n"
]
},
{
"name": "stderr",
"output_type": "stream",
"text": [
"2023-11-23 22:37:48,282 \u001b[1;37mINFO\u001b[0m cycquery.utils.profile - Finished executing function run_query in 0.080187 s\n"
"2023-11-23 23:02:47,471 \u001b[1;37mINFO\u001b[0m cycquery.utils.profile - Finished executing function run_query in 0.076606 s\n"
]
},
{
Expand Down Expand Up @@ -236,10 +236,10 @@
"id": "24043abc-1878-4e00-8229-36d4a0368b98",
"metadata": {
"execution": {
"iopub.execute_input": "2023-11-24T03:37:48.291826Z",
"iopub.status.busy": "2023-11-24T03:37:48.291374Z",
"iopub.status.idle": "2023-11-24T03:37:48.351296Z",
"shell.execute_reply": "2023-11-24T03:37:48.350078Z"
"iopub.execute_input": "2023-11-24T04:02:47.484192Z",
"iopub.status.busy": "2023-11-24T04:02:47.483783Z",
"iopub.status.idle": "2023-11-24T04:02:47.543610Z",
"shell.execute_reply": "2023-11-24T04:02:47.542126Z"
},
"tags": []
},
Expand All @@ -248,14 +248,14 @@
"name": "stderr",
"output_type": "stream",
"text": [
"2023-11-23 22:37:48,344 \u001b[1;37mINFO\u001b[0m cycquery.orm - Query returned successfully!\n"
"2023-11-23 23:02:47,536 \u001b[1;37mINFO\u001b[0m cycquery.orm - Query returned successfully!\n"
]
},
{
"name": "stderr",
"output_type": "stream",
"text": [
"2023-11-23 22:37:48,346 \u001b[1;37mINFO\u001b[0m cycquery.utils.profile - Finished executing function run_query in 0.039138 s\n"
"2023-11-23 23:02:47,537 \u001b[1;37mINFO\u001b[0m cycquery.utils.profile - Finished executing function run_query in 0.042015 s\n"
]
},
{
Expand Down Expand Up @@ -298,10 +298,10 @@
"id": "f6142f27-e8d1-453c-bfe2-2265d9ff1914",
"metadata": {
"execution": {
"iopub.execute_input": "2023-11-24T03:37:48.356834Z",
"iopub.status.busy": "2023-11-24T03:37:48.356507Z",
"iopub.status.idle": "2023-11-24T03:37:48.548821Z",
"shell.execute_reply": "2023-11-24T03:37:48.547656Z"
"iopub.execute_input": "2023-11-24T04:02:47.552203Z",
"iopub.status.busy": "2023-11-24T04:02:47.551770Z",
"iopub.status.idle": "2023-11-24T04:02:47.739998Z",
"shell.execute_reply": "2023-11-24T04:02:47.738444Z"
},
"tags": []
},
Expand All @@ -310,14 +310,14 @@
"name": "stderr",
"output_type": "stream",
"text": [
"2023-11-23 22:37:48,542 \u001b[1;37mINFO\u001b[0m cycquery.orm - Query returned successfully!\n"
"2023-11-23 23:02:47,732 \u001b[1;37mINFO\u001b[0m cycquery.orm - Query returned successfully!\n"
]
},
{
"name": "stderr",
"output_type": "stream",
"text": [
"2023-11-23 22:37:48,543 \u001b[1;37mINFO\u001b[0m cycquery.utils.profile - Finished executing function run_query in 0.173201 s\n"
"2023-11-23 23:02:47,734 \u001b[1;37mINFO\u001b[0m cycquery.utils.profile - Finished executing function run_query in 0.172433 s\n"
]
},
{
Expand Down
18 changes: 9 additions & 9 deletions tutorials/mimiciii.html
View file
Original file line number Diff line number Diff line change
Expand Up @@ -478,7 +478,7 @@ <h2>Imports and instantiate <code class="docutils literal notranslate"><span cla
</div>
<div class="output_area stderr docutils container">
<div class="highlight"><pre>
2023-11-23 22:37:58,713 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.orm - Database setup, ready to run queries!
2023-11-23 23:02:55,952 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.orm - Database setup, ready to run queries!
</pre></div></div>
</div>
<div class="nboutput nblast docutils container">
Expand Down Expand Up @@ -512,8 +512,8 @@ <h2>Example 1. Get all male patients with a mortality outcome.<a class="headerli
</div>
<div class="output_area stderr docutils container">
<div class="highlight"><pre>
2023-11-23 22:38:05,599 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.orm - Query returned successfully!
2023-11-23 22:38:05,600 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.utils.profile - Finished executing function run_query in 0.040093 s
2023-11-23 23:03:02,968 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.orm - Query returned successfully!
2023-11-23 23:03:02,970 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.utils.profile - Finished executing function run_query in 0.041348 s
</pre></div></div>
</div>
<div class="nboutput nblast docutils container">
Expand Down Expand Up @@ -553,8 +553,8 @@ <h2>Example 2. Get all female patient encounters with diagnoses (<code class="do
</div>
<div class="output_area stderr docutils container">
<div class="highlight"><pre>
2023-11-23 22:38:05,735 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.orm - Query returned successfully!
2023-11-23 22:38:05,737 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.utils.profile - Finished executing function run_query in 0.098095 s
2023-11-23 23:03:03,110 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.orm - Query returned successfully!
2023-11-23 23:03:03,112 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.utils.profile - Finished executing function run_query in 0.106162 s
</pre></div></div>
</div>
<div class="nboutput nblast docutils container">
Expand Down Expand Up @@ -586,8 +586,8 @@ <h2>Example 3. Get potassium lab tests for female patients.<a class="headerlink"
</div>
<div class="output_area stderr docutils container">
<div class="highlight"><pre>
2023-11-23 22:38:05,812 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.orm - Query returned successfully!
2023-11-23 22:38:05,813 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.utils.profile - Finished executing function run_query in 0.036237 s
2023-11-23 23:03:03,184 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.orm - Query returned successfully!
2023-11-23 23:03:03,186 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.utils.profile - Finished executing function run_query in 0.038073 s
</pre></div></div>
</div>
<div class="nboutput nblast docutils container">
Expand Down Expand Up @@ -624,8 +624,8 @@ <h2>Example 4. Get AaDO2 carevue chart events for male patients that have a <cod
</div>
<div class="output_area stderr docutils container">
<div class="highlight"><pre>
2023-11-23 22:39:15,290 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.orm - Query returned successfully!
2023-11-23 22:39:15,291 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.utils.profile - Finished executing function run_query in 69.433935 s
2023-11-23 23:04:12,719 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.orm - Query returned successfully!
2023-11-23 23:04:12,720 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.utils.profile - Finished executing function run_query in 69.493639 s
</pre></div></div>
</div>
<div class="nboutput nblast docutils container">
Expand Down
Loading

0 comments on commit 55591cb

Please sign in to comment.