BUG: fix bug in case 2 resolution

Vini2 · Sep 3, 2024 · 9b33d0a · 9b33d0a
1 parent 5a99c72
commit 9b33d0a
Showing 1 changed file with 4 additions and 4 deletions.
diff --git a/reneo/workflow/scripts/reneo.py b/reneo/workflow/scripts/reneo.py
@@ -262,17 +262,17 @@ def worker_resolve_components(component_queue, results_queue, **kwargs):
 
                     if (
                         unitig1_len > unitig2_len
-                        and unitig1_len > minlength
-                        and unitig2_name in self_looped_nodes
+                        and unitig1_len > kwargs["minlength"]
+                        and unitig2_name in kwargs["self_looped_nodes"]
                     ):
                         unitig_to_consider = unitig1
                         unitig_name = unitig1_name
                         repeat_unitig = unitig2
                         repeat_unitig_name = unitig2_name
                     elif (
                         unitig2_len > unitig1_len
-                        and unitig2_len > minlength
-                        and unitig1_name in self_looped_nodes
+                        and unitig2_len > kwargs["minlength"]
+                        and unitig1_name in kwargs["self_looped_nodes"]
                     ):
                         unitig_to_consider = unitig2
                         unitig_name = unitig2_name