add IndexDedup to singularity

WEHI-ResearchComputing · Jun 4, 2024 · 9902a2c · 9902a2c
1 parent c6b354f
commit 9902a2c
Showing 1 changed file with 2 additions and 2 deletions.
diff --git a/nextflow.config b/nextflow.config
@@ -34,7 +34,7 @@ profiles {
         docker.enabled        = false
         singularity.pullTimeout = "3h"
         process {
-            withLabel: 'BWAAlign|Samtools|Bcftools|Fastqc|Multiqc|RGridss|Rfilter' {
+            withLabel: 'BWAAlign|Samtools|Bcftools|Fastqc|Multiqc|RGridss|Rfilter|IndexDedup' {
                 container = "ghcr.io/wehi-researchcomputing/nf-malaria-variant-analysis:latest"
             }
         }
@@ -43,7 +43,7 @@ profiles {
         docker.enabled        = true
         singularity.enabled   = false
         process {
-            withLabel: 'BWAAlign|Samtools|Bcftools|Fastqc|Multiqc|RGridss|Rfilter' {
+            withLabel: 'BWAAlign|Samtools|Bcftools|Fastqc|Multiqc|RGridss|Rfilter|IndexDedup' {
                 container = "ghcr.io/wehi-researchcomputing/nf-malaria-variant-analysis:latest"
             }
         }