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guide/backproject/index.html

@@ -413,7 +413,7 @@ <h3 id="slicing-options">Slicing Options</h3>
 <li>📁 <code>Slice Configuration File</code> - Path to the <code>-configuration.json</code> file which includes information generated during slicing needed for backprojection.</li>
 <li>📁 <code>Output File Folder</code> - The folder to save all the resulting files into.</li>
 <li><code>Output File Name</code> - Base name for all output files.</li>
-<li><code>Output MIP Level</code> - The mip level to output the backprojection in (essentially an upsample option). Use this if you downsampled in the slicing step.</li>
+<li><code>Output MIP Level</code> - The MIP level to output the backprojection in (essentially an upsample option). Use this if you downsampled in the slicing step.</li>
 <li><code>Upsample Order</code> - The interpolation order Ouroboros uses to interpolate values from a lower MIP level. If you check the binary option, feel free to set this to 0.</li>
 <li><code>Backprojection Compression</code> - The compression option to use for the backprojected tiff(s). Recommended options: <code>none</code>, <code>zlib</code>, <code>zstd</code>.</li>
 <li><code>Output Single File</code> - Whether to output one tiff stack file or a folder of files.</li>

guide/slicing/index.html

@@ -405,16 +405,15 @@ <h3 id="slicing-options">Slicing Options</h3>
 <li><code>Slice Height</code> - The output height of each slice image.</li>
 <li>📁 <code>Output File Folder</code> - The folder to save all the resulting files into.</li>
 <li><code>Output File Name</code> - Base name for all output files.</li>
-<li><code>Annotation MIP Level</code> - The annotation layer's MIP level. </li>
-<li><code>Output MIP Level</code> - The mip level to output slices in (essentially a downsample option).</li>
+<li><code>Annotation MIP Level</code> - The annotation layer's MIP level. 0 is the highest resolution.</li>
+<li><code>Output MIP Level</code> - The MIP level to output slices in (essentially a downsample option). 1 is a good starting point.</li>
 <li><code>Slicing Parameters</code><ul>
 <li><code>Distance Between Slices</code> - The distance between each slice along the annotation path.</li>
 <li><code>Use Adaptive Slicing</code> - Rather than just using equidistant slices, add more slices in more curved areas.</li>
-<li><code>Adaptive Slicing Ratio</code> - 1 means consider distance and curvature equally, 0.5 is biased towards distance, and 2 is biased towards curvature.</li>
+<li><code>Adaptive Slicing Ratio</code> - 1 indicates to consider distance and curvature equally, 0.5 is biased towards distance, and 2 is biased towards curvature.</li>
 </ul>
 </li>
 <li><code>Output Single File</code> - Whether to output one tiff stack file or a folder of files.</li>
-<li><code>Connect Endpoints</code> - Connect the first point in the path to the last point. This is not recommended.</li>
 <li><code>Bounding Box Parameters</code><ul>
 <li><code>Max Depth</code> - The maximum depth for binary space partitioning. It is not recommended to change this option unless you encounter RAM issues.</li>
 <li><code>Target Slices Per Box</code> - If you are running on a low-RAM system, or you are taking very large slices, you may want to decrease this.</li>