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Update CHANGELOG.txt
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@thw17
thw17 authored Jun 13, 2018
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# List in reverse chronological order
# Only listing changes since previous version/release

Version 1.1.3
* Moved utility scripts (explore_thresholds, etc.) so that they were installed correctly via Pip and Conda

Version 1.1.0
* Added --include_fixed flag to allow plotting of read balances < 0.05 and == 1.0 if desired
* --xx_ref_out and --xy_ref_out now allow placement of output anywhere, while --xx_ref_out_name and --xy_ref_out_name allow choice of name of output, but files will be placed in XYalign output directory structure
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