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@shenlab-sinai

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aartrama/README.md

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  1. shenlab-sinai/DeepRegFinder shenlab-sinai/DeepRegFinder Public

    DeepRegFinder is a deep learning based program used to identify DNA regulatory elements using ChIP-seq

    Python 9 2

  2. RRHO_Modified.R RRHO_Modified.R Public

    Forked from shenlab-sinai/RRHO_Modified.R

    A slightly modified version of RRHO (http://www.bioconductor.org/packages/release/bioc/html/RRHO.html) which outputs common scale and enables 4 lists for RRHO compare.

    R

  3. shenlab-sinai/Gene-Attributes shenlab-sinai/Gene-Attributes Public

    A shiny app that obtains the coordinates and description of an input gene list (Ensembl v90) using biomaRt package.

    R 1 3

  4. DESeq2-Explorer DESeq2-Explorer Public

    Shiny app for visualizing 2 factor design RNA-seq data using DESeq2.

    R 1