testing new permissions to see if the error is gone

adeans · Mar 27, 2024 · 98c617a · 98c617a
1 parent 1d09c04
commit 98c617a
Show file tree

Hide file tree

Showing 13 changed files with 39 additions and 39 deletions.
diff --git a/gallont-base.json b/gallont-base.json
@@ -16,9 +16,9 @@
         "val" : "Plant Gall Ontology"
       }, {
         "pred" : "http://www.w3.org/2002/07/owl#versionInfo",
-        "val" : "2024-03-25"
+        "val" : "2024-03-27"
       } ],
-      "version" : "http://purl.obolibrary.org/obo/gallont/releases/2024-03-25/gallont-base.json"
+      "version" : "http://purl.obolibrary.org/obo/gallont/releases/2024-03-27/gallont-base.json"
     },
     "nodes" : [ {
       "id" : "http://purl.obolibrary.org/obo/GALLONT_0000000",
@@ -67,7 +67,7 @@
       }
     }, {
       "id" : "http://purl.obolibrary.org/obo/GALLONT_0000003",
-      "lbl" : "cavity",
+      "lbl" : "plant gall cavity",
       "type" : "CLASS",
       "meta" : {
         "definition" : {

diff --git a/gallont-base.obo b/gallont-base.obo
@@ -1,11 +1,11 @@
 format-version: 1.2
-data-version: gallont/releases/2024-03-25/gallont-base.owl
+data-version: gallont/releases/2024-03-27/gallont-base.owl
 ontology: gallont/gallont-base
 property_value: http://purl.org/dc/elements/1.1/type IAO:8000001
 property_value: http://purl.org/dc/terms/description "None" xsd:string
 property_value: http://purl.org/dc/terms/license https://creativecommons.org/publicdomain/zero/1.0/
 property_value: http://purl.org/dc/terms/title "Plant Gall Ontology" xsd:string
-property_value: owl:versionInfo "2024-03-25" xsd:string
+property_value: owl:versionInfo "2024-03-27" xsd:string
 
 [Term]
 id: GALLONT:0000001
@@ -25,7 +25,7 @@ property_value: seeAlso https://www.inaturalist.org/observations/33275700
 
 [Term]
 id: GALLONT:0000003
-name: cavity
+name: plant gall cavity
 def: "A plant anatomical space that is located inside a gall." []
 is_a: PO:0025117
 property_value: http://purl.org/dc/terms/creator https://orcid.org/0000-0002-2119-4663
@@ -425,7 +425,7 @@ property_value: seeAlso https://doi.org/10.3390%2Finsects12100850
 id: GALLONT:0000041
 name: larval cavity
 def: "A cavity that is occupied by one or more gall inhabitants." []
-is_a: GALLONT:0000003 ! cavity
+is_a: GALLONT:0000003 ! plant gall cavity
 property_value: http://purl.org/dc/terms/creator http://orcid.org/0000-0002-2119-4663
 property_value: http://purl.org/dc/terms/date "2024-01-19T02:27:40Z" xsd:string
 

diff --git a/gallont-base.owl b/gallont-base.owl
@@ -11,12 +11,12 @@
      xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"
      xmlns:dcterms="http://purl.org/dc/terms/">
     <owl:Ontology rdf:about="http://purl.obolibrary.org/obo/gallont/gallont-base.owl">
-        <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/gallont/releases/2024-03-25/gallont-base.owl"/>
+        <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/gallont/releases/2024-03-27/gallont-base.owl"/>
         <dce:type rdf:resource="http://purl.obolibrary.org/obo/IAO_8000001"/>
         <dcterms:description>None</dcterms:description>
         <dcterms:license rdf:resource="https://creativecommons.org/publicdomain/zero/1.0/"/>
         <dcterms:title>Plant Gall Ontology</dcterms:title>
-        <owl:versionInfo>2024-03-25</owl:versionInfo>
+        <owl:versionInfo>2024-03-27</owl:versionInfo>
     </owl:Ontology>
 
 
@@ -186,7 +186,7 @@
         <obo:IAO_0000115 xml:lang="en">A plant anatomical space that is located inside a gall.</obo:IAO_0000115>
         <dcterms:creator rdf:resource="https://orcid.org/0000-0002-2119-4663"/>
         <dcterms:date>2023-06-19T19:44:42Z</dcterms:date>
-        <rdfs:label xml:lang="en">cavity</rdfs:label>
+        <rdfs:label xml:lang="en">plant gall cavity</rdfs:label>
         <rdfs:seeAlso rdf:resource="https://www.inaturalist.org/observations/117192961"/>
     </owl:Class>
 

diff --git a/gallont-full.json b/gallont-full.json
@@ -13,9 +13,9 @@
         "val" : "Plant Gall Ontology"
       }, {
         "pred" : "http://www.w3.org/2002/07/owl#versionInfo",
-        "val" : "2024-03-25"
+        "val" : "2024-03-27"
       } ],
-      "version" : "http://purl.obolibrary.org/obo/gallont/releases/2024-03-25/gallont-full.json"
+      "version" : "http://purl.obolibrary.org/obo/gallont/releases/2024-03-27/gallont-full.json"
     },
     "nodes" : [ {
       "id" : "http://purl.obolibrary.org/obo/IAO_0000125",
@@ -505,7 +505,7 @@
       }
     }, {
       "id" : "http://purl.obolibrary.org/obo/GALLONT_0000003",
-      "lbl" : "cavity",
+      "lbl" : "plant gall cavity",
       "type" : "CLASS",
       "meta" : {
         "definition" : {

diff --git a/gallont-full.obo b/gallont-full.obo
@@ -1,5 +1,5 @@
 format-version: 1.2
-data-version: gallont/releases/2024-03-25/gallont-full.owl
+data-version: gallont/releases/2024-03-27/gallont-full.owl
 subsetdef: 3_STAR ""
 subsetdef: abnormal_slim ""
 subsetdef: absent_slim ""
@@ -58,7 +58,7 @@ ontology: gallont/gallont-full
 property_value: dcterms-license https://creativecommons.org/publicdomain/zero/1.0/
 property_value: http://purl.org/dc/terms/description "None" xsd:string
 property_value: http://purl.org/dc/terms/title "Plant Gall Ontology" xsd:string
-property_value: owl:versionInfo "2024-03-25" xsd:string
+property_value: owl:versionInfo "2024-03-27" xsd:string
 
 [Term]
 id: BFO:0000002
@@ -194,7 +194,7 @@ property_value: seeAlso https://www.inaturalist.org/observations/33275700
 
 [Term]
 id: GALLONT:0000003
-name: cavity
+name: plant gall cavity
 def: "A plant anatomical space that is located inside a gall." []
 is_a: PO:0025117 ! plant anatomical space
 property_value: http://purl.org/dc/terms/creator https://orcid.org/0000-0002-2119-4663
@@ -594,7 +594,7 @@ property_value: seeAlso https://doi.org/10.3390%2Finsects12100850
 id: GALLONT:0000041
 name: larval cavity
 def: "A cavity that is occupied by one or more gall inhabitants." []
-is_a: GALLONT:0000003 ! cavity
+is_a: GALLONT:0000003 ! plant gall cavity
 property_value: http://purl.org/dc/terms/creator http://orcid.org/0000-0002-2119-4663
 property_value: http://purl.org/dc/terms/date "2024-01-19T02:27:40Z" xsd:string
 

diff --git a/gallont-full.owl b/gallont-full.owl
@@ -22,11 +22,11 @@
      xmlns:oboInOwl="http://www.geneontology.org/formats/oboInOwl#"
      xmlns:ncbitaxon="http://purl.obolibrary.org/obo/ncbitaxon#">
     <owl:Ontology rdf:about="http://purl.obolibrary.org/obo/gallont/gallont-full.owl">
-        <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/gallont/releases/2024-03-25/gallont-full.owl"/>
+        <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/gallont/releases/2024-03-27/gallont-full.owl"/>
         <dcterms:description>None</dcterms:description>
         <dcterms:license rdf:resource="https://creativecommons.org/publicdomain/zero/1.0/"/>
         <dcterms:title>Plant Gall Ontology</dcterms:title>
-        <owl:versionInfo>2024-03-25</owl:versionInfo>
+        <owl:versionInfo>2024-03-27</owl:versionInfo>
     </owl:Ontology>
 
 
@@ -3661,7 +3661,7 @@ For example, A and B may be gene products and binding of B by A positively regul
         <obo:IAO_0000115 xml:lang="en">A plant anatomical space that is located inside a gall.</obo:IAO_0000115>
         <dcterms:creator rdf:resource="https://orcid.org/0000-0002-2119-4663"/>
         <dcterms:date>2023-06-19T19:44:42Z</dcterms:date>
-        <rdfs:label xml:lang="en">cavity</rdfs:label>
+        <rdfs:label xml:lang="en">plant gall cavity</rdfs:label>
         <rdfs:seeAlso rdf:resource="https://www.inaturalist.org/observations/117192961"/>
     </owl:Class>
 

diff --git a/gallont.json b/gallont.json
@@ -13,9 +13,9 @@
         "val" : "Plant Gall Ontology"
       }, {
         "pred" : "http://www.w3.org/2002/07/owl#versionInfo",
-        "val" : "2024-03-25"
+        "val" : "2024-03-27"
       } ],
-      "version" : "http://purl.obolibrary.org/obo/gallont/releases/2024-03-25/gallont.json"
+      "version" : "http://purl.obolibrary.org/obo/gallont/releases/2024-03-27/gallont.json"
     },
     "nodes" : [ {
       "id" : "http://purl.obolibrary.org/obo/IAO_0000125",
@@ -505,7 +505,7 @@
       }
     }, {
       "id" : "http://purl.obolibrary.org/obo/GALLONT_0000003",
-      "lbl" : "cavity",
+      "lbl" : "plant gall cavity",
       "type" : "CLASS",
       "meta" : {
         "definition" : {

diff --git a/gallont.obo b/gallont.obo
@@ -1,5 +1,5 @@
 format-version: 1.2
-data-version: releases/2024-03-25
+data-version: releases/2024-03-27
 subsetdef: 3_STAR ""
 subsetdef: abnormal_slim ""
 subsetdef: absent_slim ""
@@ -58,7 +58,7 @@ ontology: gallont
 property_value: dcterms-license https://creativecommons.org/publicdomain/zero/1.0/
 property_value: http://purl.org/dc/terms/description "None" xsd:string
 property_value: http://purl.org/dc/terms/title "Plant Gall Ontology" xsd:string
-property_value: owl:versionInfo "2024-03-25" xsd:string
+property_value: owl:versionInfo "2024-03-27" xsd:string
 
 [Term]
 id: BFO:0000002
@@ -194,7 +194,7 @@ property_value: seeAlso https://www.inaturalist.org/observations/33275700
 
 [Term]
 id: GALLONT:0000003
-name: cavity
+name: plant gall cavity
 def: "A plant anatomical space that is located inside a gall." []
 is_a: PO:0025117 ! plant anatomical space
 property_value: http://purl.org/dc/terms/creator https://orcid.org/0000-0002-2119-4663
@@ -594,7 +594,7 @@ property_value: seeAlso https://doi.org/10.3390%2Finsects12100850
 id: GALLONT:0000041
 name: larval cavity
 def: "A cavity that is occupied by one or more gall inhabitants." []
-is_a: GALLONT:0000003 ! cavity
+is_a: GALLONT:0000003 ! plant gall cavity
 property_value: http://purl.org/dc/terms/creator http://orcid.org/0000-0002-2119-4663
 property_value: http://purl.org/dc/terms/date "2024-01-19T02:27:40Z" xsd:string
 

diff --git a/gallont.owl b/gallont.owl
@@ -22,11 +22,11 @@
      xmlns:oboInOwl="http://www.geneontology.org/formats/oboInOwl#"
      xmlns:ncbitaxon="http://purl.obolibrary.org/obo/ncbitaxon#">
     <owl:Ontology rdf:about="http://purl.obolibrary.org/obo/gallont.owl">
-        <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/gallont/releases/2024-03-25/gallont.owl"/>
+        <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/gallont/releases/2024-03-27/gallont.owl"/>
         <dcterms:description>None</dcterms:description>
         <dcterms:license rdf:resource="https://creativecommons.org/publicdomain/zero/1.0/"/>
         <dcterms:title>Plant Gall Ontology</dcterms:title>
-        <owl:versionInfo>2024-03-25</owl:versionInfo>
+        <owl:versionInfo>2024-03-27</owl:versionInfo>
     </owl:Ontology>
 
 
@@ -3661,7 +3661,7 @@ For example, A and B may be gene products and binding of B by A positively regul
         <obo:IAO_0000115 xml:lang="en">A plant anatomical space that is located inside a gall.</obo:IAO_0000115>
         <dcterms:creator rdf:resource="https://orcid.org/0000-0002-2119-4663"/>
         <dcterms:date>2023-06-19T19:44:42Z</dcterms:date>
-        <rdfs:label xml:lang="en">cavity</rdfs:label>
+        <rdfs:label xml:lang="en">plant gall cavity</rdfs:label>
         <rdfs:seeAlso rdf:resource="https://www.inaturalist.org/observations/117192961"/>
     </owl:Class>
 

diff --git a/src/ontology/imports/bfo_import.owl b/src/ontology/imports/bfo_import.owl
@@ -7,9 +7,9 @@ Prefix(rdfs:=<http://www.w3.org/2000/01/rdf-schema#>)
 
 
 Ontology(<http://purl.obolibrary.org/obo/gallont/imports/bfo_import.owl>
-<http://purl.obolibrary.org/obo/gallont/releases/2024-03-25/imports/bfo_import.owl>
+<http://purl.obolibrary.org/obo/gallont/releases/2024-03-27/imports/bfo_import.owl>
 Annotation(<http://purl.org/dc/elements/1.1/source> <http://purl.obolibrary.org/obo/bfo/2019-08-26/bfo.owl>)
-Annotation(owl:versionInfo "2024-03-25")
+Annotation(owl:versionInfo "2024-03-27")
 
 Declaration(AnnotationProperty(<http://purl.obolibrary.org/obo/IAO_0000115>))
 Declaration(AnnotationProperty(<http://purl.obolibrary.org/obo/IAO_0000116>))

diff --git a/src/ontology/imports/pato_import.owl b/src/ontology/imports/pato_import.owl
@@ -7,9 +7,9 @@ Prefix(rdfs:=<http://www.w3.org/2000/01/rdf-schema#>)
 
 
 Ontology(<http://purl.obolibrary.org/obo/gallont/imports/pato_import.owl>
-<http://purl.obolibrary.org/obo/gallont/releases/2024-03-25/imports/pato_import.owl>
+<http://purl.obolibrary.org/obo/gallont/releases/2024-03-27/imports/pato_import.owl>
 Annotation(<http://purl.org/dc/elements/1.1/source> <http://purl.obolibrary.org/obo/pato/releases/2023-05-18/pato.owl>)
-Annotation(owl:versionInfo "2024-03-25")
+Annotation(owl:versionInfo "2024-03-27")
 
 Declaration(Class(<http://purl.obolibrary.org/obo/BFO_0000002>))
 Declaration(Class(<http://purl.obolibrary.org/obo/BFO_0000003>))

diff --git a/src/ontology/imports/po_import.owl b/src/ontology/imports/po_import.owl
@@ -7,9 +7,9 @@ Prefix(rdfs:=<http://www.w3.org/2000/01/rdf-schema#>)
 
 
 Ontology(<http://purl.obolibrary.org/obo/gallont/imports/po_import.owl>
-<http://purl.obolibrary.org/obo/gallont/releases/2024-03-25/imports/po_import.owl>
+<http://purl.obolibrary.org/obo/gallont/releases/2024-03-27/imports/po_import.owl>
 Annotation(<http://purl.org/dc/elements/1.1/source> <http://purl.obolibrary.org/obo/po/releases/2024-02-16/po.owl>)
-Annotation(owl:versionInfo "2024-03-25")
+Annotation(owl:versionInfo "2024-03-27")
 
 Declaration(Class(<http://purl.obolibrary.org/obo/BFO_0000002>))
 Declaration(Class(<http://purl.obolibrary.org/obo/BFO_0000003>))
@@ -531,7 +531,7 @@ AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/RO_0000053> "has
 InverseFunctionalObjectProperty(<http://purl.obolibrary.org/obo/RO_0000053>)
 ObjectPropertyRange(<http://purl.obolibrary.org/obo/RO_0000053> <http://purl.obolibrary.org/obo/BFO_0000020>)
 
-# Object Property: <http://purl.obolibrary.org/obo/RO_0000056> (participates in)
+# Object Property: <http://purl.obolibrary.org/obo/RO_0000056> (participates_in)
 
 AnnotationAssertion(<http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/RO_0000056> "a relation between a continuant and a process, in which the continuant is somehow involved in the process"@en)
 AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasDbXref> <http://purl.obolibrary.org/obo/RO_0000056> "RO:0000056")

diff --git a/src/ontology/imports/ro_import.owl b/src/ontology/imports/ro_import.owl
@@ -7,9 +7,9 @@ Prefix(rdfs:=<http://www.w3.org/2000/01/rdf-schema#>)
 
 
 Ontology(<http://purl.obolibrary.org/obo/gallont/imports/ro_import.owl>
-<http://purl.obolibrary.org/obo/gallont/releases/2024-03-25/imports/ro_import.owl>
+<http://purl.obolibrary.org/obo/gallont/releases/2024-03-27/imports/ro_import.owl>
 Annotation(<http://purl.org/dc/elements/1.1/source> <http://purl.obolibrary.org/obo/ro/releases/2024-02-13/ro.owl>)
-Annotation(owl:versionInfo "2024-03-25")
+Annotation(owl:versionInfo "2024-03-27")
 
 Declaration(Class(<http://purl.obolibrary.org/obo/BFO_0000002>))
 Declaration(Class(<http://purl.obolibrary.org/obo/BFO_0000003>))