Install gsl into container and reenable mac wheels #493
Workflow file for this run
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| name: Tests | |
| on: | |
| push: | |
| branches: | |
| - main | |
| tags: | |
| - '*' | |
| pull_request: | |
| jobs: | |
| check_skip_flags: | |
| name: Check skip flags | |
| runs-on: ubuntu-latest | |
| outputs: | |
| head-commit-message: ${{ steps.get_head_commit_message.outputs.headCommitMsg }} | |
| steps: | |
| - name: Checkout repo | |
| uses: actions/checkout@v3 | |
| with: | |
| ref: ${{ env.GITHUB_SHA }} | |
| - name: Get head commit message | |
| id: get_head_commit_message | |
| run: echo "HEAD_COMMIT_MESSAGE=$(git show -s --format=%s)" >> "$GITHUB_OUTPUT" | |
| tests: | |
| name: Python ${{ matrix.python-version }} on ${{ matrix.os }} with numpy ${{ matrix.numpy-version }}, no gsl ${{ matrix.gala-nogsl }}, deps ${{ matrix.pip-test-deps }} | |
| runs-on: ${{ matrix.os }} | |
| needs: check_skip_flags | |
| # if: ${{ github.event.pull_request.draft == false && !contains(github.event.pull_request.labels.*.name, 'docs only') && !contains(github.event.head_commit.message, '[skip tests]')}} | |
| if: ${{ ! contains(needs.check_skip_flags.outputs.HEAD_COMMIT_MESSAGE, '[skip tests]') }} | |
| strategy: | |
| fail-fast: true | |
| matrix: | |
| python-version: ["3.10", "3.11", "3.12"] | |
| os: ["ubuntu-latest", "macos-latest"] | |
| numpy-version: ["latest"] | |
| gala-nogsl: ["0"] | |
| pip-test-deps: ["test"] | |
| include: | |
| - name: Oldest numpy version supported | |
| os: ubuntu-latest | |
| python-version: "3.11" | |
| numpy-version: "1.24" | |
| gala-nogsl: "0" | |
| pip-test-deps: "test" | |
| - name: Install without GSL | |
| os: ubuntu-latest | |
| python-version: "3.11" | |
| numpy-version: "latest" | |
| gala-nogsl: "1" | |
| pip-test-deps: "test" | |
| - name: With optional dependencies | |
| os: ubuntu-latest # note: galpy install failed on macos here | |
| python-version: "3.11" | |
| numpy-version: "latest" | |
| gala-nogsl: "0" | |
| pip-test-deps: "test,extra" | |
| steps: | |
| - uses: actions/checkout@v4 | |
| with: | |
| fetch-depth: 0 | |
| - uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| allow-prereleases: true | |
| - name: WTF | |
| run: echo ${{ github.event.head_commit.message }} | |
| # # For animation tests | |
| # - uses: FedericoCarboni/setup-ffmpeg@v3 | |
| # if: ${{ !startsWith(matrix.os, 'mac') }} | |
| # continue-on-error: true | |
| # with: | |
| # # Not strictly necessary, but it may prevent rate limit | |
| # # errors especially on GitHub-hosted macos machines. | |
| # github-token: ${{ secrets.GITHUB_TOKEN }} | |
| # ffmpeg-version: "6.1.0" | |
| # id: setup-ffmpeg | |
| # # Mac: | |
| # - name: Setup Mac - GSL | |
| # if: startsWith(matrix.os, 'mac') | |
| # run: | | |
| # brew install gsl | |
| # # Ubuntu: | |
| # - name: Setup Linux - GSL | |
| # if: runner.os == 'Linux' | |
| # run: | | |
| # sudo apt-get update | |
| # sudo apt-get install gsl-bin libgsl0-dev build-essential | |
| # sudo apt-get install libhdf5-serial-dev # TODO: remove when h5py has 3.11 wheels | |
| # - name: Install package and dependencies | |
| # run: python -m pip install -e ".[${{ matrix.pip-test-deps }}]" | |
| # env: | |
| # GALA_NOGSL: ${{ matrix.gala-nogsl }} | |
| # - name: Update versions if testing min versions | |
| # if: matrix.numpy-version != 'latest' | |
| # run: | | |
| # python -m pip install numpy~=${{ matrix.numpy-version }} | |
| # - name: Run tests | |
| # run: >- | |
| # python -m pytest -ra --cov --cov-report=xml --cov-report=term | |
| # --durations=20 . | |
| # - name: Upload coverage report | |
| # uses: codecov/[email protected] | |
| # with: | |
| # token: ${{ secrets.CODECOV_TOKEN }} |