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Fix lls #134

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Dec 20, 2024
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6 changes: 5 additions & 1 deletion NEWS
Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
akgfmaps 3.6.1 (In development)
akgfmaps 3.6.1 (December 20, 2024)
----------------------------------------------------------------

BUG FIX
Expand All @@ -7,6 +7,10 @@ BUG FIX
inst/extdata/LL_Survey_Stations_Active2023.shp with
inst/extdata/LonglineStationsActive.shp
- Revert EBS shelf stratum shapefile to 2022 version.
- Remove land area (STRATUM = 0) from GOA survey area polygon in
inst/extdata/goa_area.shp
- Remove land area (STRATUM = 0) from AI survey area polygon in
inst/extdata/ai_area.shp


akgfmaps 3.6.0 (December 12, 2024)
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1 change: 1 addition & 0 deletions analysis/known_issues/ai_area_boundaries_2024/ai_area.prj
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PROJCS["NAD_1983_Albers",GEOGCS["GCS_North_American_1983",DATUM["D_North_American_1983",SPHEROID["GRS_1980",6378137.0,298.257222101]],PRIMEM["Greenwich",0.0],UNIT["Degree",0.0174532925199433]],PROJECTION["Albers"],PARAMETER["False_Easting",0.0],PARAMETER["False_Northing",0.0],PARAMETER["Central_Meridian",-180.0],PARAMETER["Standard_Parallel_1",50.0],PARAMETER["Standard_Parallel_2",60.0],PARAMETER["Latitude_Of_Origin",55.0],UNIT["Meter",1.0]]
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ANSI 1252
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PROJCS["NAD_1983_Albers",GEOGCS["GCS_North_American_1983",DATUM["D_North_American_1983",SPHEROID["GRS_1980",6378137.0,298.257222101]],PRIMEM["Greenwich",0.0],UNIT["Degree",0.0174532925199433]],PROJECTION["Albers"],PARAMETER["False_Easting",0.0],PARAMETER["False_Northing",0.0],PARAMETER["Central_Meridian",-180.0],PARAMETER["Standard_Parallel_1",50.0],PARAMETER["Standard_Parallel_2",60.0],PARAMETER["Latitude_Of_Origin",55.0],UNIT["Meter",1.0]]
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43 changes: 43 additions & 0 deletions analysis/known_issues/ai_area_boundaries_2024/ai_strata.shp.xml
Original file line number Diff line number Diff line change
@@ -0,0 +1,43 @@
<?xml version="1.0" encoding="UTF-8"?>
<metadata xml:lang="en"><Esri><CreaDate>20210513</CreaDate><CreaTime>08261000</CreaTime><SyncOnce>FALSE</SyncOnce><ArcGISProfile>ItemDescription</ArcGISProfile><ArcGISFormat>1.0</ArcGISFormat><DataProperties><itemProps><itemName Sync="TRUE">ai_strata</itemName><imsContentType Sync="TRUE">002</imsContentType><nativeExtBox><westBL Sync="TRUE">-626983.000000</westBL><eastBL Sync="TRUE">955519.312500</eastBL><southBL Sync="TRUE">-429267.093750</southBL><northBL Sync="TRUE">45904.832031</northBL><exTypeCode Sync="TRUE">1</exTypeCode></nativeExtBox><itemSize Sync="TRUE">5.668</itemSize><itemLocation><linkage Sync="TRUE">file://\\AKCSL1172-SR19\C$\Users\sean.rohan\Work\afsc\akgfmaps\data\ai_strata.shp</linkage><protocol Sync="TRUE">Local Area Network</protocol></itemLocation></itemProps><coordRef><type Sync="TRUE">Projected</type><geogcsn Sync="TRUE">GCS_North_American_1983</geogcsn><projcsn Sync="TRUE">NAD_1983_Albers</projcsn><peXml Sync="TRUE">&lt;ProjectedCoordinateSystem xsi:type='typens:ProjectedCoordinateSystem' xmlns:xsi='http://www.w3.org/2001/XMLSchema-instance' xmlns:xs='http://www.w3.org/2001/XMLSchema' xmlns:typens='http://www.esri.com/schemas/ArcGIS/10.7'&gt;&lt;WKT&gt;PROJCS[&amp;quot;NAD_1983_Albers&amp;quot;,GEOGCS[&amp;quot;GCS_North_American_1983&amp;quot;,DATUM[&amp;quot;D_North_American_1983&amp;quot;,SPHEROID[&amp;quot;GRS_1980&amp;quot;,6378137.0,298.257222101]],PRIMEM[&amp;quot;Greenwich&amp;quot;,0.0],UNIT[&amp;quot;Degree&amp;quot;,0.0174532925199433]],PROJECTION[&amp;quot;Albers&amp;quot;],PARAMETER[&amp;quot;False_Easting&amp;quot;,0.0],PARAMETER[&amp;quot;False_Northing&amp;quot;,0.0],PARAMETER[&amp;quot;Central_Meridian&amp;quot;,-180.0],PARAMETER[&amp;quot;Standard_Parallel_1&amp;quot;,50.0],PARAMETER[&amp;quot;Standard_Parallel_2&amp;quot;,60.0],PARAMETER[&amp;quot;Latitude_Of_Origin&amp;quot;,55.0],UNIT[&amp;quot;Meter&amp;quot;,1.0]]&lt;/WKT&gt;&lt;XOrigin&gt;-14173400&lt;/XOrigin&gt;&lt;YOrigin&gt;-9697300&lt;/YOrigin&gt;&lt;XYScale&gt;317750125.40184397&lt;/XYScale&gt;&lt;ZOrigin&gt;-100000&lt;/ZOrigin&gt;&lt;ZScale&gt;10000&lt;/ZScale&gt;&lt;MOrigin&gt;-100000&lt;/MOrigin&gt;&lt;MScale&gt;10000&lt;/MScale&gt;&lt;XYTolerance&gt;0.001&lt;/XYTolerance&gt;&lt;ZTolerance&gt;0.001&lt;/ZTolerance&gt;&lt;MTolerance&gt;0.001&lt;/MTolerance&gt;&lt;HighPrecision&gt;true&lt;/HighPrecision&gt;&lt;/ProjectedCoordinateSystem&gt;</peXml><csUnits Sync="TRUE">Linear Unit: Meter (1.000000)</csUnits></coordRef><copyHistory><copy source="U:\alaska\constructs\zones\strata\ai_strata\ai_strata" dest="\\AKCSL1172-SR19\C$\Users\sean.rohan\Work\afsc\akgfmaps\data\ai_strata" date="20210513" time="08261000"></copy></copyHistory></DataProperties><SyncDate>20210513</SyncDate><SyncTime>08263600</SyncTime><ModDate>20210513</ModDate><ModTime>08263600</ModTime></Esri><mdLang><languageCode value="en"/><countryCode value="USA" Sync="TRUE"></countryCode></mdLang><mdHrLv><ScopeCd value="005"/></mdHrLv><mdContact><rpOrgName>National Oceanic and Atmospheric Administration (NOAA) Alaska Fisheries Science Center (AFSC) Resource Assessment and Conservation Engineering Division (RACE)</rpOrgName><rpCntInfo><cntPhone><voiceNum>not available</voiceNum></cntPhone><cntAddress><delPoint>7600 Sand Point Way N.E., Bldg. 4</delPoint><city>Seattle</city><adminArea>WA</adminArea><postCode>98115</postCode><country>USA</country><eMailAdd>[email protected]</eMailAdd></cntAddress></rpCntInfo><role><RoleCd value="007"/></role></mdContact><mdDateSt>20101004</mdDateSt><mdStanName>ArcGIS Metadata</mdStanName><mdStanVer>1.0</mdStanVer><dataIdInfo><idCitation><resTitle>AFSC/RACE: Strata for the Aleutian Islands</resTitle><date><pubDate>20100101</pubDate></date><citRespParty><rpOrgName>Alaska Fisheries Science Center</rpOrgName><role><RoleCd value="006"/></role></citRespParty><citRespParty><rpOrgName>Groundfish Program</rpOrgName><role><RoleCd value="006"/></role></citRespParty><citRespParty><rpOrgName>Michael Martin</rpOrgName><role><RoleCd value="006"/></role></citRespParty><presForm><PresFormCd value="005"/></presForm></idCitation><idAbs>&lt;DIV STYLE="text-align:Left;"&gt;&lt;DIV&gt;&lt;DIV&gt;&lt;P&gt;&lt;SPAN&gt;Strata created as part of the survey design based on bathymetry and other 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Applications or inferences derived from the data should be carefully considered for accuracy. Acknowledgement of NOAA/NMFS/AFSC, as the source from which these data were obtained in any publications and/or other representations of these, data is suggested.</othConsts></LegConsts></resConst><dataLang><languageCode value="en" country="US"/><countryCode value="USA" Sync="TRUE"></countryCode></dataLang><dataExt><geoEle><GeoBndBox esriExtentType="search"><westBL>170</westBL><eastBL>-165</eastBL><southBL>51</southBL><northBL>55</northBL><exTypeCode Sync="TRUE">1</exTypeCode></GeoBndBox></geoEle></dataExt><dataExt><exDesc>publication</exDesc><tempEle><TempExtent><exTemp><TM_Instant><tmPosition>2010</tmPosition></TM_Instant></exTemp></TempExtent></tempEle><geoEle/></dataExt><envirDesc Sync="TRUE"> Version 6.2 (Build 9200) ; Esri ArcGIS 10.7.1.11595</envirDesc><descKeys><thesaName uuidref="723f6998-058e-11dc-8314-0800200c9a66"/><keyword Sync="TRUE">002</keyword></descKeys><spatRpType><SpatRepTypCd value="001"/></spatRpType><tpCat><TopicCatCd value="002"/></tpCat><tpCat><TopicCatCd value="014"/></tpCat></dataIdInfo><dqInfo><dqScope><scpLvl><ScopeCd value="005"/></scpLvl></dqScope><dqReport type="DQConcConsis"><measDesc>Not applicable.</measDesc></dqReport><dqReport type="DQCompOm"><measDesc>Not applicable.</measDesc></dqReport><dataLineage><prcStep><stepDesc>NA</stepDesc></prcStep></dataLineage></dqInfo><distInfo><distFormat><formatName Sync="TRUE">Shapefile</formatName></distFormat><distTranOps><transSize Sync="TRUE">5.668</transSize></distTranOps></distInfo><mdHrLvName Sync="TRUE">dataset</mdHrLvName><refSysInfo><RefSystem><refSysID><identCode code="0"/></refSysID></RefSystem></refSysInfo><spdoinfo><ptvctinf><esriterm Name="ai_strata"><efeatyp Sync="TRUE">Simple</efeatyp><efeageom code="4" Sync="TRUE"></efeageom><esritopo Sync="TRUE">FALSE</esritopo><efeacnt Sync="TRUE">864</efeacnt><spindex Sync="TRUE">TRUE</spindex><linrefer Sync="TRUE">FALSE</linrefer></esriterm></ptvctinf></spdoinfo><spatRepInfo><VectSpatRep><geometObjs Name="ai_strata"><geoObjTyp><GeoObjTypCd value="002" Sync="TRUE"></GeoObjTypCd></geoObjTyp><geoObjCnt Sync="TRUE">864</geoObjCnt></geometObjs><topLvl><TopoLevCd value="001" Sync="TRUE"></TopoLevCd></topLvl></VectSpatRep></spatRepInfo><eainfo><detailed Name="ai_strata"><enttyp><enttypl Sync="TRUE">ai_strata</enttypl><enttypt Sync="TRUE">Feature Class</enttypt><enttypc Sync="TRUE">864</enttypc></enttyp><attr><attrlabl Sync="TRUE">FID</attrlabl><attalias Sync="TRUE">FID</attalias><attrtype Sync="TRUE">OID</attrtype><attwidth Sync="TRUE">4</attwidth><atprecis Sync="TRUE">0</atprecis><attscale Sync="TRUE">0</attscale><attrdef Sync="TRUE">Internal feature number.</attrdef><attrdefs Sync="TRUE">ESRI</attrdefs><attrdomv><udom Sync="TRUE">Sequential unique whole numbers that are automatically generated.</udom></attrdomv></attr><attr><attrlabl Sync="TRUE">Shape</attrlabl><attalias Sync="TRUE">Shape</attalias><attrtype Sync="TRUE">Geometry</attrtype><attwidth Sync="TRUE">0</attwidth><atprecis Sync="TRUE">0</atprecis><attscale Sync="TRUE">0</attscale><attrdef Sync="TRUE">Feature geometry.</attrdef><attrdefs Sync="TRUE">ESRI</attrdefs><attrdomv><udom Sync="TRUE">Coordinates defining the features.</udom></attrdomv></attr><attr><attrlabl Sync="TRUE">AREA</attrlabl><attalias Sync="TRUE">AREA</attalias><attrtype Sync="TRUE">Single</attrtype><attwidth Sync="TRUE">13</attwidth><atprecis Sync="TRUE">0</atprecis><attscale Sync="TRUE">0</attscale></attr><attr><attrlabl Sync="TRUE">PERIMETER</attrlabl><attalias Sync="TRUE">PERIMETER</attalias><attrtype Sync="TRUE">Single</attrtype><attwidth Sync="TRUE">13</attwidth><atprecis Sync="TRUE">0</atprecis><attscale Sync="TRUE">0</attscale></attr><attr><attrlabl Sync="TRUE">AI_STRATA_</attrlabl><attalias Sync="TRUE">AI_STRATA_</attalias><attrtype Sync="TRUE">Integer</attrtype><attwidth Sync="TRUE">9</attwidth><atprecis Sync="TRUE">9</atprecis><attscale Sync="TRUE">0</attscale></attr><attr><attrlabl Sync="TRUE">AI_STRATA1</attrlabl><attalias Sync="TRUE">AI_STRATA1</attalias><attrtype Sync="TRUE">Integer</attrtype><attwidth Sync="TRUE">9</attwidth><atprecis Sync="TRUE">9</atprecis><attscale Sync="TRUE">0</attscale></attr><attr><attrlabl Sync="TRUE">AREA_KM2</attrlabl><attalias Sync="TRUE">AREA_KM2</attalias><attrtype Sync="TRUE">Single</attrtype><attwidth Sync="TRUE">13</attwidth><atprecis Sync="TRUE">0</atprecis><attscale Sync="TRUE">0</attscale></attr><attr><attrlabl Sync="TRUE">STRATUM</attrlabl><attalias Sync="TRUE">STRATUM</attalias><attrtype Sync="TRUE">SmallInteger</attrtype><attwidth Sync="TRUE">4</attwidth><atprecis Sync="TRUE">4</atprecis><attscale Sync="TRUE">0</attscale></attr></detailed></eainfo><Binary><Thumbnail><Data EsriPropertyType="PictureX">/9j/4AAQSkZJRgABAQEAAQABAAD/2wBDAAgGBgcGBQgHBwcJCQgKDBQNDAsLDBkSEw8UHRofHh0a
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# Remove land area from AI survey area

library(sf)
library(dplyr)

ai_area_without_land <- sf::st_read(here::here("analysis", "known_issues", "ai_area_boundaries_2024", "ai_strata.shp"), quiet = TRUE) |>
dplyr::filter(STRATUM > 0 & STRATUM < 800) |>
dplyr::group_by(REGION = "AI") |>
dplyr::summarise(AREA_KM2 = sum(AREA_KM2))

ai_area_without_land |>
sf::st_write(here::here("inst", "extdata", "ai_area.shp"),
append = FALSE)


plot(ai_area_without_land)
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PROJCS["NAD_1983_Albers",GEOGCS["GCS_North_American_1983",DATUM["D_North_American_1983",SPHEROID["GRS_1980",6378137.0,298.257222101]],PRIMEM["Greenwich",0.0],UNIT["Degree",0.0174532925199433]],PROJECTION["Albers"],PARAMETER["False_Easting",0.0],PARAMETER["False_Northing",0.0],PARAMETER["Central_Meridian",-154.0],PARAMETER["Standard_Parallel_1",55.0],PARAMETER["Standard_Parallel_2",65.0],PARAMETER["Latitude_Of_Origin",50.0],UNIT["Meter",1.0]]
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PROJCS["NAD_1983_Albers",GEOGCS["GCS_North_American_1983",DATUM["D_North_American_1983",SPHEROID["GRS_1980",6378137.0,298.257222101]],PRIMEM["Greenwich",0.0],UNIT["Degree",0.0174532925199433]],PROJECTION["Albers"],PARAMETER["False_Easting",0.0],PARAMETER["False_Northing",0.0],PARAMETER["Central_Meridian",-154.0],PARAMETER["Standard_Parallel_1",55.0],PARAMETER["Standard_Parallel_2",65.0],PARAMETER["Latitude_Of_Origin",50.0],UNIT["Meter",1.0]]
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