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@llbbl llbbl commented Jun 29, 2025

Add Complete Python Testing Infrastructure

Summary

This PR establishes a comprehensive testing infrastructure for the PyGAD CNN project, providing a solid foundation for test-driven development and continuous integration.

Changes Made

Package Management

  • Poetry Setup: Configured Poetry as the primary package manager via pyproject.toml
  • Dependency Migration: Migrated existing dependencies from requirements.txt to Poetry
  • Lock File: Generated poetry.lock for reproducible builds

Testing Framework

  • pytest: Added as the main testing framework with extensive configuration
  • pytest-cov: Integrated for code coverage reporting
  • pytest-mock: Included for advanced mocking capabilities

Project Structure

tests/
├── __init__.py
├── conftest.py          # Shared fixtures and configuration
├── test_setup_validation.py  # Infrastructure validation tests
├── unit/
│   └── __init__.py
└── integration/
    └── __init__.py

Configuration (pyproject.toml)

  • Test Discovery: Configured patterns for test files and functions
  • Coverage Settings:
    • 80% minimum coverage threshold
    • HTML and XML report generation
    • Exclusions for test files and virtual environments
  • Custom Markers: @pytest.mark.unit, @pytest.mark.integration, @pytest.mark.slow
  • Script Commands: Both poetry run test and poetry run tests work

Shared Fixtures (conftest.py)

  • temp_dir: Temporary directory management
  • sample_input_data & sample_output_data: CNN test data
  • mock_config: Configuration dictionary for testing
  • sample_conv_layer & sample_pool_layer: Layer configurations
  • reset_random_seed: Ensures reproducible tests
  • capture_stdout: For testing print statements
  • mock_file_operations: File I/O mocking

Development Environment

  • Updated .gitignore: Added Python-specific patterns, testing artifacts, and Claude settings
  • Coverage Reports: Automatically generated in htmlcov/ and coverage.xml

Running Tests

Install Dependencies

poetry install

Run All Tests

poetry run test
# or
poetry run tests

Run Specific Test Types

# Unit tests only
poetry run pytest -m unit

# Integration tests only  
poetry run pytest -m integration

# Exclude slow tests
poetry run pytest -m "not slow"

View Coverage Report

# Generate and open HTML coverage report
poetry run test
open htmlcov/index.html

Notes

  • The validation tests confirm all infrastructure components work correctly
  • Coverage is currently low (13.65%) as only validation tests exist - this is expected
  • The 80% coverage threshold will encourage comprehensive testing as the codebase grows
  • Poetry.lock is tracked in git for reproducible environments across developers

Next Steps

Developers can now immediately start writing unit and integration tests for the CNN implementation using the established infrastructure.

- Set up Poetry as package manager with pyproject.toml configuration
- Add pytest, pytest-cov, and pytest-mock as development dependencies
- Configure pytest with coverage reporting (80% threshold, HTML/XML outputs)
- Create test directory structure with unit/integration subdirectories
- Add shared pytest fixtures in conftest.py for common testing needs
- Configure custom test markers (unit, integration, slow)
- Add comprehensive .gitignore for Python development
- Include validation tests to verify setup functionality
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