python executables into experiments folder

aidos-lab · Jul 1, 2024 · 0b53aa3 · 0b53aa3
1 parent 7231fcf
commit 0b53aa3
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Showing 6 changed files with 10 additions and 4 deletions.
diff --git a/README.md b/README.md
@@ -19,14 +19,20 @@ $ poetry install
 2. Run experiments:
 
 ```s
-$ python ./run.py --mode "single" --config "/path/to/config.yaml" --wandb "wandb-project-id"
+$ python ./experiments/run.py --mode "single" --config "/path/to/config.yaml" --wandb "wandb-project-id"
 ```
 for running a single experiment or
 ```s
-$ python ./run.py --mode "all" --wandb "wandb-project-id"
+$ python ./experiments/run.py --mode "all" --wandb "wandb-project-id"
 ```
 for running all experiments.
 
+3. Run benchmarking
+
+```s
+$ python ./experiments/run.py --mode "<single/all>" --checkpoints "<checkpoints/to/be/benchmarked>"
+```
+
 ## Results
 
 Results can be inspected in [notebooks/export_results.ipynb](./notebooks/export_results.ipynb)

diff --git a/generate_configs.py → experiments/generate_configs.py b/generate_configs.py → experiments/generate_configs.py
diff --git a/run.py → experiments/run.py b/run.py → experiments/run.py
diff --git a/test.py → experiments/test.py b/test.py → experiments/test.py
diff --git a/test.sh b/test.sh
@@ -1,4 +1,4 @@
-python ./test.py \
+python ./experiments/test.py \
     --mode "single" \
     --config "./configs/gat_betti_numbers_degree_transform_onehot.yaml" \
     --checkpoints "./checkpoints"
diff --git a/train.sh b/train.sh
@@ -1,6 +1,6 @@
 #!/bin/bash
 
-python ./run.py \
+python ./experiments/run.py \
     --mode "single" \
     --config "./configs/gat_betti_numbers_degree_transform_onehot.yaml" \
     --wandb "mantra-proj" \