Schema consistency updates

airr-community · Nov 7, 2024 · 30bed48 · 30bed48
1 parent ffccc62
commit 30bed48
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Showing 4 changed files with 7 additions and 4 deletions.
diff --git a/lang/R/inst/extdata/airr-schema.yaml b/lang/R/inst/extdata/airr-schema.yaml
@@ -99,6 +99,7 @@ CURIEMap:
         type: identifier
         default:
             map: IEDB_EPITOPE
+            provider: IEDB_EPITOPE
         map:
             IEDB_EPITOPE:
                 iri_prefix: "https://www.iedb.org/epitope/"
@@ -184,7 +185,7 @@ InformationProvider:
         IEDB_RECEPTOR:
             request:
                 url: "https://query-api.iedb.org/tcr_search?receptor_group_id=eq.{local_id}"
-                url: "https://query-api.iedb.org/tcr_search?receptor_group_id=eq.{local_id}"
+                url: "https://query-api.iedb.org/bcr_search?receptor_group_id=eq.{local_id}"
                 response: application/json
         IEDB_EPITOPE:
             request:

diff --git a/lang/python/airr/specs/airr-schema.yaml b/lang/python/airr/specs/airr-schema.yaml
@@ -99,6 +99,7 @@ CURIEMap:
         type: identifier
         default:
             map: IEDB_EPITOPE
+            provider: IEDB_EPITOPE
         map:
             IEDB_EPITOPE:
                 iri_prefix: "https://www.iedb.org/epitope/"
@@ -184,7 +185,7 @@ InformationProvider:
         IEDB_RECEPTOR:
             request:
                 url: "https://query-api.iedb.org/tcr_search?receptor_group_id=eq.{local_id}"
-                url: "https://query-api.iedb.org/tcr_search?receptor_group_id=eq.{local_id}"
+                url: "https://query-api.iedb.org/bcr_search?receptor_group_id=eq.{local_id}"
                 response: application/json
         IEDB_EPITOPE:
             request:

diff --git a/specs/airr-schema-openapi3.yaml b/specs/airr-schema-openapi3.yaml
@@ -187,7 +187,7 @@ InformationProvider:
         IEDB_RECEPTOR:
             request:
                 url: "https://query-api.iedb.org/tcr_search?receptor_group_id=eq.{local_id}"
-                url: "https://query-api.iedb.org/tcr_search?receptor_group_id=eq.{local_id}"
+                url: "https://query-api.iedb.org/bcr_search?receptor_group_id=eq.{local_id}"
                 response: application/json
         IEDB_EPITOPE:
             request:

diff --git a/specs/airr-schema.yaml b/specs/airr-schema.yaml
@@ -99,6 +99,7 @@ CURIEMap:
         type: identifier
         default:
             map: IEDB_EPITOPE
+            provider: IEDB_EPITOPE
         map:
             IEDB_EPITOPE:
                 iri_prefix: "https://www.iedb.org/epitope/"
@@ -184,7 +185,7 @@ InformationProvider:
         IEDB_RECEPTOR:
             request:
                 url: "https://query-api.iedb.org/tcr_search?receptor_group_id=eq.{local_id}"
-                url: "https://query-api.iedb.org/tcr_search?receptor_group_id=eq.{local_id}"
+                url: "https://query-api.iedb.org/bcr_search?receptor_group_id=eq.{local_id}"
                 response: application/json
         IEDB_EPITOPE:
             request: