sync tests for langs

CONTRIBUTING.rst

@@ -212,9 +212,25 @@ software. For all cases, you will want a local copy of the github repository.
 
   git clone https://github.com/airr-community/airr-standards.git
 
+A Makefile is provided to simplify tasks such as copying spec files to the lang
+directories, copying test data, running tests and checks, and building documentation.
+The default make target will display a help info for all targets.
+
+.. code-block:: bash
+
+  make
+
+If your local environment does not have the appropriate software, you can build
+and use the docker container. You will need python3, R and npm to run tests for
+all languages.
+
 If you will be working in a docker container, you can pull down the airr-standards
-image, which has all of the prerequisites installed, or you can use your own image.
-The airr-standards image provides a python3 environment.
+image from docker hub, which has all of the prerequisites installed,
+or you can build your own image. Note: automated builds are not performed on docker
+hub so the ``latest`` tag is often out of date. It is generally safe to build
+your own container from your local source.
+The airr-standards image installs the reference library for all languages and
+builds the documentation.
 
 .. code-block:: bash
 

Makefile

@@ -1,41 +1,46 @@
 # helper commands for keeping the language directories in sync
 
-# note: "help" MUST be the first target in the file,
-# when the user types "make" they should get help info
+# note: "help" MUST be the first target in the file, so
+# when the user types "make" they get help info by default
 help:
 	@echo ""
 	@echo "Helper commands for AIRR Standards repository"
+	@echo "---------------------------------------------"
 	@echo ""
-	@echo "make gen-v2       -- Generate OpenAPI V2 spec from the V3 spec"
-	@echo "make build-docs   -- Build documentation"
-	@echo "make spec-copy    -- Copy spec files to language directories"
-	@echo "make data-copy    -- Copy test data files to language directories"
-	@echo "make checks       -- Run consistency checks on spec files"
-	@echo "make tests        -- Run all language test suites"
-	@echo "make python-tests -- Run Python test suite"
-	@echo "make r-tests      -- Run R test suite"
-	@echo "make js-tests     -- Run Javascript test suite"
+	@echo "make spec-copy       -- Copy spec files to language directories"
+	@echo "make data-copy       -- Copy test data files to language directories"
+	@echo ""
+	@echo "make docker-latest   -- Build docker image with latest tag"
+	@echo ""
+	@echo "make checks          -- Run consistency checks on spec files"
+	@echo "make tests           -- Run all language test suites"
+	@echo "make python-tests    -- Run Python test suite"
+	@echo "make r-tests         -- Run R test suite"
+	@echo "make js-tests        -- Run Javascript test suite"
+	@echo ""
+	@echo "make build-docs      -- Build documentation"
 	@echo ""
-
-gen-v2:
-	@echo "Not implemented"
 
 build-docs:
 	sphinx-build -a -E -b html docs docs/_build/html
 
+docker-latest:
+	@echo "Building latest docker image"
+	docker build -f docker/Dockerfile -t airrc/airr-standards:latest .
+
 spec-copy:
 	@echo "Copying specs to language directories"
 	cp specs/airr-schema.yaml lang/python/airr/specs
 	cp specs/airr-schema-openapi3.yaml lang/python/airr/specs
 	cp specs/airr-schema.yaml lang/R/inst/extdata
 	cp specs/airr-schema-openapi3.yaml lang/R/inst/extdata
-#	cp specs/airr-schema.yaml lang/js/
-#	cp specs/airr-schema-openapi3.yaml lang/js/
+	cp specs/airr-schema-openapi3.yaml lang/js/
 
 data-copy:
 	@echo "Copying test data to language directories"
 	cp tests/data/* lang/python/tests/data
 	cp tests/data/* lang/R/tests/data-tests
+	cp tests/data/* lang/js/tests/data
 
 checks:
 	@echo "Running consistency checks on spec files"
@@ -53,3 +58,4 @@ r-tests:
 
 js-tests:
 	@echo "Running Javascript test suite"
+	cd lang/js; npm test