fix: add underscore to qualifier if not present and convert it to low…

…ercase
alliance-genome · Mar 30, 2020 · 3d8543f · 3d8543f
1 parent 9db3559
commit 3d8543f
Showing 1 changed file with 2 additions and 1 deletion.
diff --git a/genedescriptions/descriptions_generator.py b/genedescriptions/descriptions_generator.py
@@ -87,7 +87,8 @@ def set_terms_groups(self, module, config, limit_to_group, humans):
                 if annotation["evidence"]["type"] in evidence_codes_groups_map:
                     aspect = annotation["aspect"]
                     ev_group = evidence_codes_groups_map[annotation["evidence"]["type"]]
-                    qualifier = "_".join(sorted(annotation["qualifiers"])) if "qualifiers" in annotation else ""
+                    qualifier = "_".join(sorted([q.lower().replace(" ", "_") for q in annotation["qualifiers"]])) if \
+                        "qualifiers" in annotation else ""
                     if prepostfix_special_cases_sent_map and (aspect, ev_group, qualifier) in \
                         prepostfix_special_cases_sent_map:
                         for special_case in prepostfix_special_cases_sent_map[(aspect, ev_group, qualifier)]: