test(ontology_tools): added IC to test

alliance-genome · Jan 27, 2022 · 714075e · 714075e
1 parent 57af851
commit 714075e
Showing 1 changed file with 2 additions and 1 deletion.
diff --git a/tests/test_ontology_tools.py b/tests/test_ontology_tools.py
@@ -19,7 +19,7 @@ def setUp(self):
         self.this_dir = os.path.split(__file__)[0]
         self.conf_parser = GenedescConfigParser(os.path.join(self.this_dir, os.path.pardir, "tests", "config_test.yml"))
         self.df = DataManager(do_relations=None, go_relations=["subClassOf", "BFO:0000050"],
-                              expr_relations=["BFO:0000050"])
+                              expr_relations=["subClassOf", "BFO:0000050"])
         logging.basicConfig(filename=None, level="ERROR", format='%(asctime)s - %(name)s - %(levelname)s: %(message)s')
 
     def load_go_ontology(self):
@@ -45,6 +45,7 @@ def test_load_ontology_with_loop(self):
             self.this_dir, "data", "ONTOLOGY_FBBT_loop.obo"),
                                         ontology_cache_path=os.path.join(self.this_dir, "cache", "FBBT.obo"),
                                         config=self.conf_parser)
+        set_ic_ontology_struct(self.df.expression_ontology)
 
     def test_get_common_ancestors(self):
         self.load_go_ontology()