fix(ontobio): restored working version of ontobio

alliance-genome · Apr 2, 2021 · c5fbc3e · c5fbc3e
1 parent caaeb1a
commit c5fbc3e
Show file tree

Hide file tree

Showing 2 changed files with 2 additions and 0 deletions.
diff --git a/genedescriptions/data_manager.py b/genedescriptions/data_manager.py
@@ -314,6 +314,7 @@ def load_associations_from_file(self, associations_type: DataType, associations_
             associations_cache_path (str): path to cache file for the associations
             config (GenedescConfigParser): configuration object where to read properties
         """
+        logger.info("Loading associations from file")
         assoc_config = AssocParserConfig(remove_double_prefixes=True, paint=True)
         assocs = AssociationSetFactory().create_from_assocs(assocs=GafParser(config=assoc_config).parse(
             file=self._get_cached_file(cache_path=associations_cache_path, file_source_url=associations_url),

diff --git a/requirements.txt b/requirements.txt
@@ -5,3 +5,4 @@ pyyaml>=4.2b1
 numpy
 ontobio==1.20.0
 num2words
+dacite
-Original file line number
+Diff line change
@@ Expand Up / @@ -5,3 +5,4 @@ pyyaml>=4.2b1 @@
     numpy
     ontobio==1.20.0
     num2words
+    dacite