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1. Deep-Learning-MHCI Deep-Learning-MHCI Public

   For MHC-I protein-peptide binding predictions: Deep Learning model with CNN and Snakemake workflow

   Python 12 6

2. c3net c3net Public

   Allows inferring undirected gene networks with direct physical interactions from expression data.

3. dc3net dc3net Public

   Inferring Condition-Specific Networks via Differential Network Inference

4. Depest Depest Public

   The software package provides several dependency score estimators that can be used in any Gene Network Inference Algorithms.

   1

5. netmes netmes Public

   Network based performance measures with ensemble approach on the network level.