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Fix aggregate microbatches bug #714

Fix aggregate microbatches bug

Fix aggregate microbatches bug #714

Workflow file for this run

name: Test installation
on:
pull_request:
branches:
- master
jobs:
# -----------------------------------------
# Use a module from local source
# -----------------------------------------
use_as_local_module:
strategy:
fail-fast: false
matrix:
os: [ubuntu-latest, macos-latest, windows-latest]
python-version: [3.8, 3.9]
runs-on: ${{ matrix.os }}
steps:
- uses: actions/checkout@v3
- name: Set up Python ${{ matrix.python-version }} on ${{ matrix.os }}
uses: actions/setup-python@v4
with:
python-version: ${{ matrix.python-version }}
- name: Install batchflow requirements
run: |
pip install --user -U pip poetry
pip install -e .
- name: Run 'import batchflow'
run: python -c 'import batchflow'
- name: Run basic tests
run: |
pip install pytest
cd batchflow/tests
pytest --disable-pytest-warnings -v dataset_test.py filesindex_test.py datasetindex_test.py
# -----------------------------------------
# Install with pip
# -----------------------------------------
install_with_pip:
strategy:
fail-fast: false
matrix:
os: [ubuntu-latest, macos-latest, windows-latest]
python-version: [3.8, 3.9]
runs-on: ${{ matrix.os }}
steps:
- name: Set up Python ${{ matrix.python-version }} on ${{ matrix.os }}
uses: actions/setup-python@v4
with:
python-version: ${{ matrix.python-version }}
- name: Install batchflow with pip
run: |
pip install --user -U pip wheel
pip install --user "git+https://github.com/${{ github.event.pull_request.head.repo.full_name }}.git@${{ github.head_ref }}"
- name: Run 'import batchflow'
run: python -c 'import batchflow'
- uses: actions/checkout@v3
- name: Run basic tests
run: |
pip install -U pytest
cd batchflow/tests
pytest --disable-pytest-warnings -v dataset_test.py filesindex_test.py datasetindex_test.py
# -----------------------------------------
# Install with poetry
# -----------------------------------------
install_with_poetry:
strategy:
fail-fast: false
matrix:
os: [ubuntu-latest, macos-latest, windows-latest]
python-version: [3.8, 3.9]
runs-on: ${{ matrix.os }}
steps:
- name: Set up Python ${{ matrix.python-version }} on ${{ matrix.os }}
uses: actions/setup-python@v4
with:
python-version: ${{ matrix.python-version }}
- name: Install batchflow with poetry
run: |
pip install --user -U pip
pip install wheel poetry
echo '[tool.poetry]
name = "test_project"
description = "test"
version = "0.0.1"
authors = ["Test <[email protected]>"]
[tool.poetry.dependencies]
python = "^${{ matrix.python-version }}"
pytest = "^7.0"
[build-system]
requires = ["poetry-core"]
build-backend = "poetry.core.masonry.api"
' >> pyproject.toml
poetry add git+https://github.com/${{ github.event.pull_request.head.repo.full_name }}.git@${{ github.head_ref }}
- name: Run 'import batchflow' in installed environment
run: poetry run python -c 'import batchflow'
- uses: actions/checkout@v3
with:
path: src
- name: Prepare directory
if: runner.os != 'Windows'
run: |
cp -r src/batchflow/tests .
- name: Prepare directory
if: runner.os == 'Windows'
run: |
xcopy /I /S src\batchflow\tests tests
- name: Run basic tests
run: |
cd tests
poetry run python -m pytest --disable-pytest-warnings -v dataset_test.py filesindex_test.py datasetindex_test.py