The software is expected to work with Python version 3.7-3.9. Create conda environment with the preferable python version:
$ conda create -n xrf-tomo-env python=3.8 -c conda-forge $ conda activate xrf-tomo-env
tomopy and xraylib (dependency of PyXRF) are not available from PyPI and need
to be installed from conda-forge:
$ conda install tomopy pyxrf -c conda-forge
svmbir is an optional dependency. Install svmbir separately if needed. Instructions
are slightly different depending on OS. Linux:
$ pip install svmbir
OSX:
$ ln -sf /usr/local/bin/gcc-10 /usr/local/bin/gcc $ CC=gcc pip install --no-binary svmbir svmbir
Windows:
$ CC=gcc pip install svmbir
Finally install this package. From PyPI:
$ pip install xrf-tomo
From source (develop install). Clone the repository in the appropriate directory and
then install with pip:
$ git clone https://github.com/NSLS-II-SRX/xrf-tomo $ cd xrf-tomo $ pip install -e .
Activate the environment:
$ conda activate xrf-tomo-env
In IPython environment or a script import necessary or all functions from the package, e.g.
from xrf_tomo import *