Automated Tests for Galaxy on Kubernetes Stacks

Galaxy on GKE deployed via GalaxyKubeMan (AnVIL)

Deployment Testing

Twice a day, GalaxyKubeMan (GKM) is deployed on GKE, mimicking an AnVIL deployment. The purpose of these tests is to provide reasonable confidence that Galaxy is launchable on the AnVIL everyday.

Below is a plot summarizing successful deployments and GKM install times. Click here or on the image for more details.

Tool Testing

After each successful deployment, automated tool tests are also run against the instance. These serve as an end-to-end-like test for Galaxy, providing confidence that Galaxy is not only launchable but functional. These tests cycle on a weekly basis through the entire suite of tools installed by default on AnVIL, providing reasonable confidence that the tools encountered by most users remain functional, and automating the detection and reporting of tools breaking.

Latest tool tests for each chunk:

Chunk ID	Tool List	Latest report	Previous report
0	Toolset	Mon Oct 14 00:53:24 2024	Mon Oct 07 00:51:33 2024
1	Toolset	Mon Oct 14 12:52:38 2024	Mon Oct 07 12:52:44 2024
2	Toolset	Tue Oct 15 00:50:47 2024	Tue Oct 08 00:49:34 2024
3	Toolset	Tue Oct 15 12:52:56 2024	Tue Oct 08 12:49:39 2024
4	Toolset	Wed Oct 16 00:51:24 2024	Wed Oct 09 00:50:08 2024
5	Toolset	Wed Oct 16 12:51:22 2024	Wed Oct 09 12:51:20 2024
6	Toolset	Thu Oct 17 00:50:57 2024	Thu Oct 10 00:50:09 2024
7	Toolset	Thu Oct 17 12:51:34 2024	Thu Oct 10 12:50:38 2024
8	Toolset	Fri Oct 18 00:52:19 2024	Fri Oct 11 00:52:08 2024
9	Toolset	Fri Oct 18 12:51:27 2024	Fri Oct 11 12:51:44 2024
10	Toolset	Sat Oct 19 00:50:54 2024	Sat Oct 12 00:50:15 2024
11	Toolset	Sat Oct 12 12:48:05 2024	Sat Oct 05 12:48:53 2024
12	Toolset	Sun Oct 13 00:54:04 2024	Sun Oct 06 00:53:52 2024
13	Toolset	Sun Oct 13 12:48:31 2024	Sun Oct 06 12:48:00 2024