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Update README for the next version of SOAPdenovo2
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Ruibang Laurent Luo authored and Ruibang Laurent Luo committed Oct 9, 2015
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# Manual of SOAPdenovo2

## What's next of SOAPdenovo2

MEGAHIT is the formal successor of SOAPdenovo2

MEGAHIT: An ultra-fast single-node solution for large and complex metagenomics assembly via succinct de Bruijn graph
http://www.ncbi.nlm.nih.gov/pubmed/25609793
https://github.com/voutcn/megahit

## Introduction

SOAPdenovo is a novel short-read assembly method that can build a de novo draft assembly for the human-sized genomes. The program is specially designed to assemble Illumina GA short reads. It creates new opportunities for building reference sequences and carrying out accurate analyses of unexplored genomes in a cost effective way.
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