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update test
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raphenya committed Aug 24, 2023
1 parent 52eeb43 commit 08f6c7a
Showing 1 changed file with 1 addition and 2 deletions.
3 changes: 1 addition & 2 deletions tests/test_1.py
Original file line number Diff line number Diff line change
Expand Up @@ -98,7 +98,7 @@ def test_rgi_nucleotide_sequence(rgi):
run_rgi(rgi, 'contig', os.path.join(working_directory,inputs,filename), output_file)

assert validate_results(output_file, 100, 'NDM-1', 'Perfect') == True
assert validate_results(output_file, 100, "APH(3')-VI", 'Perfect') == True
assert validate_results(output_file, 98.46, "APH(3')-VIa", 'Strict') == True
assert validate_results(output_file, 100, 'mphE', 'Perfect') == True
assert validate_results(output_file, 100, 'msrE', 'Perfect') == True

Expand Down Expand Up @@ -160,4 +160,3 @@ def test_rgi_nudge_loose_to_strict(rgi):
run_rgi(rgi, 'contig', os.path.join(working_directory,inputs,filename), output_file)

assert validate_results(output_file, 98.06, 'Escherichia coli EF-Tu mutants conferring resistance to Pulvomycin', 'Strict') == True

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