Merge pull request #15 from matrulda/master

Update seqreports to 9adcd5fcc767c780dd471d331c3a0c2ffa370e1c
arteria-project · Sep 18, 2024 · 59f8705 · 59f8705
2 parents e15ec7c + c5f2eb6
commit 59f8705
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diff --git a/seqreports b/seqreports
diff --git a/tests/test_integration.py b/tests/test_integration.py
@@ -60,7 +60,7 @@ def get_app(self):
                 'environment': {'NXF_TEMP': '/tmp/'},
                 'nextflow_parameters': {
                     'config': str(src_path / 'seqreports/nextflow.config'),
-                    'profile': 'singularity,snpseq,test',
+                    'profile': 'singularity,dev,test',
                 },
                 'pipeline_parameters': {
                     # This is only a placeholder because the service won't