Merge pull request #199 from asapdiscovery/add_software_outputs

Add software as outputs category

content/outputs/software.md

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+---
+weight: 20
+title: Software
+description: Software produced by ASAP
+toc: true
+---
+
+Software produced by ASAP.
+
+{{< software >}}

data/outputs/software.yaml

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+asapdiscovery:
+  name: "asapdiscovery"
+  description: Monorepository for running computational chemistry project support for ASAP's viral targets, including docking, free energy calculations, chemoinformatics  and machine learning.
+  permalink: http://asapdiscovery.org/outputs/software/#asapdiscovery
+  projects: [Project 5, Computational Chemistry Core]
+  links:
+  - name: GitHub
+    url: https://github.com/asapdiscovery/asapdiscovery
+  - name: Documentation
+    url: https://asapdiscovery.readthedocs.io/en/latest
+
+choppa:
+  name: "choppa"
+  description: "A Python library for visualizing Deep Mutational Scanning data and other fitness data directly onto protein structures to enable fitness-informed decision-making in medicinal chemistry workflows in P2-P5 of ASAP's drug discovery pipeline."
+  permalink: http://asapdiscovery.org/outputs/software/#choppa
+  projects: [Project 1, Computational Chemistry Core]
+  links:
+  - name: GitHub
+    url: https://github.com/asapdiscovery/choppa
+  - name: Documentation
+    url: https://choppa.readthedocs.io
+
+argos:
+  name: "argos"
+  description: "A web-based visualization tool for viewing DMS data on protein structures that allows users to generate and share these views using a web UI. See 'choppa' package below."
+  permalink: http://asapdiscovery.org/outputs/software/#argos
+  projects: [Project 2, Computational Chemistry Core]
+  links:
+  - name: GitHub
+    url: https://github.com/asapdiscovery/argos 
+
+
+hindsight:
+  name: "hindsight"
+  description: "Generates and continuously updates statistics and graphs comparing computational chemistry predictions with gathered experimental data to aid in hit-to-lead and lead optimization campaigns."
+  permalink: http://asapdiscovery.org/outputs/software/#hindsight
+  projects: [Project 5, Computational Chemistry Core]
+  links:
+  - name: GitHub
+    url: https://github.com/asapdiscovery/hindsight-public
+
+
+falcbot:
+  name: "falcbot"
+  description: "A slack integration for running computational chemistry workflows that are developed by ASAP's computational chemistry core."
+  permalink: http://asapdiscovery.org/outputs/software/#falcbot
+  projects: [Project 5, Computational Chemistry Core]
+  links:
+  - name: GitHub
+    url: https://github.com/asapdiscovery/FALCBot

themes/kube/layouts/shortcodes/software.html

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+<!-- TODO: How should we sort the target data? -->
+{{ range $package, $output := $.Site.Data.outputs.software }}
+
+    {{ $output := merge $output (dict "id" $package) }}
+    {{ partial "research-output.html" $output }}
+
+{{ end }}