Skip to content

Commit

Permalink
Deployed 5bd0fa6 with MkDocs version: 1.6.1
Browse files Browse the repository at this point in the history
  • Loading branch information
Unknown committed Oct 10, 2024
1 parent e1f033e commit ac50532
Show file tree
Hide file tree
Showing 35 changed files with 49 additions and 34 deletions.
2 changes: 1 addition & 1 deletion 404.html
Original file line number Diff line number Diff line change
Expand Up @@ -12,7 +12,7 @@


<link rel="icon" href="/images/favicon.svg">
<meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.39">
<meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.40">



Expand Down
2 changes: 1 addition & 1 deletion about/index.html
Original file line number Diff line number Diff line change
Expand Up @@ -14,7 +14,7 @@


<link rel="icon" href="../images/favicon.svg">
<meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.39">
<meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.40">



Expand Down
2 changes: 1 addition & 1 deletion docs/assertions/assertions/index.html
Original file line number Diff line number Diff line change
Expand Up @@ -16,7 +16,7 @@


<link rel="icon" href="../../../images/favicon.svg">
<meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.39">
<meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.40">



Expand Down
2 changes: 1 addition & 1 deletion docs/assertions/fasta/index.html
Original file line number Diff line number Diff line change
Expand Up @@ -16,7 +16,7 @@


<link rel="icon" href="../../../images/favicon.svg">
<meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.39">
<meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.40">



Expand Down
2 changes: 1 addition & 1 deletion docs/assertions/files/index.html
Original file line number Diff line number Diff line change
Expand Up @@ -16,7 +16,7 @@


<link rel="icon" href="../../../images/favicon.svg">
<meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.39">
<meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.40">



Expand Down
2 changes: 1 addition & 1 deletion docs/assertions/libraries/index.html
Original file line number Diff line number Diff line change
Expand Up @@ -16,7 +16,7 @@


<link rel="icon" href="../../../images/favicon.svg">
<meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.39">
<meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.40">



Expand Down
2 changes: 1 addition & 1 deletion docs/assertions/regular-expressions/index.html
Original file line number Diff line number Diff line change
Expand Up @@ -16,7 +16,7 @@


<link rel="icon" href="../../../images/favicon.svg">
<meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.39">
<meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.40">



Expand Down
2 changes: 1 addition & 1 deletion docs/assertions/snapshots/index.html
Original file line number Diff line number Diff line change
Expand Up @@ -16,7 +16,7 @@


<link rel="icon" href="../../../images/favicon.svg">
<meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.39">
<meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.40">



Expand Down
2 changes: 1 addition & 1 deletion docs/cli/clean/index.html
Original file line number Diff line number Diff line change
Expand Up @@ -16,7 +16,7 @@


<link rel="icon" href="../../../images/favicon.svg">
<meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.39">
<meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.40">



Expand Down
2 changes: 1 addition & 1 deletion docs/cli/coverage/index.html
Original file line number Diff line number Diff line change
Expand Up @@ -16,7 +16,7 @@


<link rel="icon" href="../../../images/favicon.svg">
<meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.39">
<meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.40">



Expand Down
2 changes: 1 addition & 1 deletion docs/cli/generate/index.html
Original file line number Diff line number Diff line change
Expand Up @@ -16,7 +16,7 @@


<link rel="icon" href="../../../images/favicon.svg">
<meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.39">
<meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.40">



Expand Down
2 changes: 1 addition & 1 deletion docs/cli/init/index.html
Original file line number Diff line number Diff line change
Expand Up @@ -16,7 +16,7 @@


<link rel="icon" href="../../../images/favicon.svg">
<meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.39">
<meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.40">



Expand Down
2 changes: 1 addition & 1 deletion docs/cli/list/index.html
Original file line number Diff line number Diff line change
Expand Up @@ -16,7 +16,7 @@


<link rel="icon" href="../../../images/favicon.svg">
<meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.39">
<meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.40">



Expand Down
2 changes: 1 addition & 1 deletion docs/cli/test/index.html
Original file line number Diff line number Diff line change
Expand Up @@ -16,7 +16,7 @@


<link rel="icon" href="../../../images/favicon.svg">
<meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.39">
<meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.40">



Expand Down
2 changes: 1 addition & 1 deletion docs/configuration/index.html
Original file line number Diff line number Diff line change
Expand Up @@ -16,7 +16,7 @@


<link rel="icon" href="../../images/favicon.svg">
<meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.39">
<meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.40">



Expand Down
2 changes: 1 addition & 1 deletion docs/getting-started/index.html
Original file line number Diff line number Diff line change
Expand Up @@ -16,7 +16,7 @@


<link rel="icon" href="../../images/favicon.svg">
<meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.39">
<meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.40">



Expand Down
2 changes: 1 addition & 1 deletion docs/nftest_pipelines/index.html
Original file line number Diff line number Diff line change
Expand Up @@ -12,7 +12,7 @@


<link rel="icon" href="../../images/favicon.svg">
<meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.39">
<meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.40">



Expand Down
2 changes: 1 addition & 1 deletion docs/plugins/developing-plugins/index.html
Original file line number Diff line number Diff line change
Expand Up @@ -16,7 +16,7 @@


<link rel="icon" href="../../../images/favicon.svg">
<meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.39">
<meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.40">



Expand Down
2 changes: 1 addition & 1 deletion docs/plugins/using-plugins/index.html
Original file line number Diff line number Diff line change
Expand Up @@ -16,7 +16,7 @@


<link rel="icon" href="../../../images/favicon.svg">
<meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.39">
<meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.40">



Expand Down
2 changes: 1 addition & 1 deletion docs/running-tests/index.html
Original file line number Diff line number Diff line change
Expand Up @@ -16,7 +16,7 @@


<link rel="icon" href="../../images/favicon.svg">
<meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.39">
<meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.40">



Expand Down
2 changes: 1 addition & 1 deletion docs/testcases/global_variables/index.html
Original file line number Diff line number Diff line change
Expand Up @@ -16,7 +16,7 @@


<link rel="icon" href="../../../images/favicon.svg">
<meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.39">
<meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.40">



Expand Down
2 changes: 1 addition & 1 deletion docs/testcases/index.html
Original file line number Diff line number Diff line change
Expand Up @@ -12,7 +12,7 @@


<link rel="icon" href="../../images/favicon.svg">
<meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.39">
<meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.40">



Expand Down
2 changes: 1 addition & 1 deletion docs/testcases/nextflow_function/index.html
Original file line number Diff line number Diff line change
Expand Up @@ -16,7 +16,7 @@


<link rel="icon" href="../../../images/favicon.svg">
<meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.39">
<meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.40">



Expand Down
2 changes: 1 addition & 1 deletion docs/testcases/nextflow_pipeline/index.html
Original file line number Diff line number Diff line change
Expand Up @@ -16,7 +16,7 @@


<link rel="icon" href="../../../images/favicon.svg">
<meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.39">
<meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.40">



Expand Down
2 changes: 1 addition & 1 deletion docs/testcases/nextflow_process/index.html
Original file line number Diff line number Diff line change
Expand Up @@ -16,7 +16,7 @@


<link rel="icon" href="../../../images/favicon.svg">
<meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.39">
<meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.40">



Expand Down
2 changes: 1 addition & 1 deletion docs/testcases/nextflow_workflow/index.html
Original file line number Diff line number Diff line change
Expand Up @@ -16,7 +16,7 @@


<link rel="icon" href="../../../images/favicon.svg">
<meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.39">
<meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.40">



Expand Down
2 changes: 1 addition & 1 deletion docs/testcases/params/index.html
Original file line number Diff line number Diff line change
Expand Up @@ -16,7 +16,7 @@


<link rel="icon" href="../../../images/favicon.svg">
<meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.39">
<meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.40">



Expand Down
2 changes: 1 addition & 1 deletion docs/testcases/setup/index.html
Original file line number Diff line number Diff line change
Expand Up @@ -16,7 +16,7 @@


<link rel="icon" href="../../../images/favicon.svg">
<meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.39">
<meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.40">



Expand Down
2 changes: 1 addition & 1 deletion index.html
Original file line number Diff line number Diff line change
Expand Up @@ -14,7 +14,7 @@


<link rel="icon" href="images/favicon.svg">
<meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.39">
<meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.40">



Expand Down
2 changes: 1 addition & 1 deletion installation/index.html
Original file line number Diff line number Diff line change
Expand Up @@ -16,7 +16,7 @@


<link rel="icon" href="../images/favicon.svg">
<meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.39">
<meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.40">



Expand Down
17 changes: 16 additions & 1 deletion resources/index.html
Original file line number Diff line number Diff line change
Expand Up @@ -16,7 +16,7 @@


<link rel="icon" href="../images/favicon.svg">
<meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.39">
<meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.40">



Expand Down Expand Up @@ -1241,6 +1241,15 @@
</span>
</a>

</li>

<li class="md-nav__item">
<a href="#nf-corebytesize-making-pipeline-level-tests-with-nf-test" class="md-nav__link">
<span class="md-ellipsis">
nf-core/bytesize: Making pipeline level tests with nf-test
</span>
</a>

</li>

<li class="md-nav__item">
Expand Down Expand Up @@ -1363,6 +1372,12 @@ <h3 id="blog-post-leveraging-nf-test-for-enhanced-quality-control-in-nf-core"><s
<p>Reproducibility is an important attribute of all good science. This is specially true in the realm of bioinformatics, where software is hopefully being constantly updated, and pipelines are ideally being maintained. This blog post covers nf-test in the nf-core context.</p>
<p><a href="https://nextflow.io/blog/2024/nf-test-in-nf-core.html">Read blog post</a></p>
<hr />
<h3 id="nf-corebytesize-making-pipeline-level-tests-with-nf-test"><span class="twemoji" style="color: #EE0F0F"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 576 512"><!--! Font Awesome Free 6.6.0 by @fontawesome - https://fontawesome.com License - https://fontawesome.com/license/free (Icons: CC BY 4.0, Fonts: SIL OFL 1.1, Code: MIT License) Copyright 2024 Fonticons, Inc.--><path d="M549.655 124.083c-6.281-23.65-24.787-42.276-48.284-48.597C458.781 64 288 64 288 64S117.22 64 74.629 75.486c-23.497 6.322-42.003 24.947-48.284 48.597-11.412 42.867-11.412 132.305-11.412 132.305s0 89.438 11.412 132.305c6.281 23.65 24.787 41.5 48.284 47.821C117.22 448 288 448 288 448s170.78 0 213.371-11.486c23.497-6.321 42.003-24.171 48.284-47.821 11.412-42.867 11.412-132.305 11.412-132.305s0-89.438-11.412-132.305m-317.51 213.508V175.185l142.739 81.205z"/></svg></span> nf-core/bytesize: Making pipeline level tests with nf-test</h3>
<p>In this nf-core bytesize session, <strong>Maxime Garcia</strong> shows how to make pipeline level tests with nf-test. If you like snapshots, CI/CD, and testing, this is for you!</p>
<iframe width="560" height="315" src="https://www.youtube.com/embed/VaKcd_qgBJc" title="YouTube video player" frameborder="0" allow="accelerometer; autoplay; clipboard-write; encrypted-media; gyroscope; picture-in-picture; web-share" allowfullscreen></iframe>

<p>The presentation was recored as part of the <a href="https://nf-co.re/events/2024/bytesize_pipeline_level_tests_with_nftest">nf-core/nft-utils</a> series.</p>
<hr />
<h3 id="nf-corebytesize-nft-bam"><span class="twemoji" style="color: #EE0F0F"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 576 512"><!--! Font Awesome Free 6.6.0 by @fontawesome - https://fontawesome.com License - https://fontawesome.com/license/free (Icons: CC BY 4.0, Fonts: SIL OFL 1.1, Code: MIT License) Copyright 2024 Fonticons, Inc.--><path d="M549.655 124.083c-6.281-23.65-24.787-42.276-48.284-48.597C458.781 64 288 64 288 64S117.22 64 74.629 75.486c-23.497 6.322-42.003 24.947-48.284 48.597-11.412 42.867-11.412 132.305-11.412 132.305s0 89.438 11.412 132.305c6.281 23.65 24.787 41.5 48.284 47.821C117.22 448 288 448 288 448s170.78 0 213.371-11.486c23.497-6.321 42.003-24.171 48.284-47.821 11.412-42.867 11.412-132.305 11.412-132.305s0-89.438-11.412-132.305m-317.51 213.508V175.185l142.739 81.205z"/></svg></span> nf-core/bytesize: nft-bam</h3>
<p><strong>Nicolas Vannieuwkerke</strong> presents <em>nft-bam</em> a nf-test plugin to get stable nf-test snapshots for SAM, BAM or CRAM files.</p>
<iframe width="560" height="315" src="https://www.youtube.com/embed/wyIpQLg7JxM" title="YouTube video player" frameborder="0" allow="accelerometer; autoplay; clipboard-write; encrypted-media; gyroscope; picture-in-picture; web-share" allowfullscreen></iframe>
Expand Down
2 changes: 1 addition & 1 deletion search/search_index.json

Large diffs are not rendered by default.

Binary file modified sitemap.xml.gz
Binary file not shown.
2 changes: 1 addition & 1 deletion tutorials/github-actions/index.html
Original file line number Diff line number Diff line change
Expand Up @@ -12,7 +12,7 @@


<link rel="icon" href="../../images/favicon.svg">
<meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.39">
<meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.40">



Expand Down
2 changes: 1 addition & 1 deletion tutorials/index.html
Original file line number Diff line number Diff line change
Expand Up @@ -16,7 +16,7 @@


<link rel="icon" href="../images/favicon.svg">
<meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.39">
<meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.40">



Expand Down

0 comments on commit ac50532

Please sign in to comment.