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@avantonder avantonder released this 28 Oct 14:55
· 55 commits to main since this release
v1.1
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Learn about vigilant mode.

v1.1 - [26/10/22]

  • Fix masking bug
  • Output Picard MARKDUPLICATES metrics for multiQC
  • Delete unnecessary subworkflows and modules
  • Correct samtools index version from 1.14 to 1.15.1
  • Edit documentation
  • Standardise old modules to current syntax
  • Add skip_alignment option to make alignment creation optional
  • Edit modules.config to output low_quality_pseudogenomes.tsv
  • Update spoligotype database
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