SDePER v1.2.1
Updates:
-
Implemented a GitHub Action triggered by new release publications to test the package installation (#10).
-
Added a diagnostic UMAP plot of raw data before platform effect removal using CVAE. Also included new diagnostic plots depicting CVAE training loss.
-
Changed the default value of the
--n_marker_per_cmp
command-line option to 20. -
Added three command-line options:
--use_batch_norm
,--use_spatial_pseudo
and--cvae_train_epoch
.