Changes for v1.3.6

bbfrederick · May 12, 2023 · 08f303f · 08f303f
1 parent 14ba69b
commit 08f303f
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Showing 3 changed files with 17 additions and 9 deletions.
diff --git a/.gitignore b/.gitignore
@@ -21,8 +21,7 @@ capcalc.egg-info/*
 capcalc/_gittag.py
 
 # big data
-capcalc/data/output/orig*lfo*
-capcalc/data/output/*.nii.gz
+capcalc/data/output/*
 
 # cache
 .cache

diff --git a/CHANGELOG.md b/CHANGELOG.md
@@ -1,5 +1,9 @@
 # Release history
 
+## Version 1.3.6 (5/11/23)
+* (Docker) Updated to python 3.11 basecontainer
+* (Docker) Fixed testdocker.sh
+
 ## Version 1.3.5 (1/11/23)
 * (capfromtcs) Fixed summary statistics outputs.
 

diff --git a/testdocker.sh b/testdocker.sh
@@ -5,13 +5,18 @@ MYIPADDRESS=`ifconfig en0 | grep 'inet ' | awk '{print $2}'`
 docker run \
     --rm \
     --ipc host \
-    --mount type=bind,source=/Users/frederic/code/capcalc/capcalc/data/examples,destination=/data \
+    --mount type=bind,source=/Users/frederic/code/capcalc/capcalc/data/,destination=/data \
     -it \
     -v /tmp/.X11-unix:/tmp/.X11-unix \
     -u capcalc fredericklab/capcalc:latest \
-    rapidtide \
-        /data/src/sub-RAPIDTIDETEST.nii.gz \
-        /data/dst/sub-RAPIDTIDETEST \
-        --passes 3 \
-        --nprocs 4 \
-        --noglm
+    capfromtcs \
+        -i /data/manyfiles.txt \
+        -o /data/output/manyfiles \
+        --sampletime=0.72 \
+        --varnorm \
+        -m \
+        -b 4800 \
+        -S 1200 \
+        --quality \
+        -E default \
+        --minout=2