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6 changes: 3 additions & 3 deletions _sources/auto_examples/plot_run_benchmark.rst

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4 changes: 2 additions & 2 deletions _sources/auto_examples/plot_run_benchmark_python_R.rst
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Expand Up @@ -80,7 +80,7 @@ Demo benchmark with R/Python
|--Lasso Regression[fit_intercept=False,reg=0.5]
|--Python-PGD[use_acceleration=False]: done
|--R-PGD: done (timeout)
Saving result in: /home/circleci/project/benchmarks/benchmark_lasso/outputs/benchopt_run_2023-10-10_16h54m43.parquet
Saving result in: /home/circleci/project/benchmarks/benchmark_lasso/outputs/benchopt_run_2023-10-30_16h26m47.parquet
Save objective_curve plot of objective_value for Simulated[n_features=5000,n_samples=100,rho=0] and Lasso Regression[fit_intercept=False,reg=0.5] as: /home/circleci/project/benchmarks/benchmark_lasso/outputs/3ebdde1738d5255ff1b6b4a7ea598289_objective_value_objective_curve.pdf
Save objective_curve plot of objective_support_size for Simulated[n_features=5000,n_samples=100,rho=0] and Lasso Regression[fit_intercept=False,reg=0.5] as: /home/circleci/project/benchmarks/benchmark_lasso/outputs/3ebdde1738d5255ff1b6b4a7ea598289_objective_support_size_objective_curve.pdf
Save objective_curve plot of objective_duality_gap for Simulated[n_features=5000,n_samples=100,rho=0] and Lasso Regression[fit_intercept=False,reg=0.5] as: /home/circleci/project/benchmarks/benchmark_lasso/outputs/3ebdde1738d5255ff1b6b4a7ea598289_objective_duality_gap_objective_curve.pdf
Expand Down Expand Up @@ -136,7 +136,7 @@ Demo benchmark with R/Python
.. rst-class:: sphx-glr-timing

**Total running time of the script:** (2 minutes 3.614 seconds)
**Total running time of the script:** (2 minutes 9.969 seconds)


.. _sphx_glr_download_auto_examples_plot_run_benchmark_python_R.py:
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6 changes: 3 additions & 3 deletions _sources/auto_examples/sg_execution_times.rst
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Computation times
=================
**02:49.187** total execution time for **auto_examples** files:
**02:52.418** total execution time for **auto_examples** files:

+---------------------------------------------------------------------------------------------------+-----------+--------+
| :ref:`sphx_glr_auto_examples_plot_run_benchmark_python_R.py` (``plot_run_benchmark_python_R.py``) | 02:03.614 | 0.0 MB |
| :ref:`sphx_glr_auto_examples_plot_run_benchmark_python_R.py` (``plot_run_benchmark_python_R.py``) | 02:09.969 | 0.0 MB |
+---------------------------------------------------------------------------------------------------+-----------+--------+
| :ref:`sphx_glr_auto_examples_plot_run_benchmark.py` (``plot_run_benchmark.py``) | 00:45.573 | 0.0 MB |
| :ref:`sphx_glr_auto_examples_plot_run_benchmark.py` (``plot_run_benchmark.py``) | 00:42.449 | 0.0 MB |
+---------------------------------------------------------------------------------------------------+-----------+--------+
364 changes: 364 additions & 0 deletions _sources/tutorials/build_benchmark.rst

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4 changes: 1 addition & 3 deletions _sources/tutorials/index.rst
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@@ -1,11 +1,9 @@
.. _tutorials:


Tutorials
=========


.. toctree::
:maxdepth: 1

build_benchmark
add_solver
2 changes: 1 addition & 1 deletion _static/documentation_options.js
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@@ -1,6 +1,6 @@
var DOCUMENTATION_OPTIONS = {
URL_ROOT: document.getElementById("documentation_options").getAttribute('data-url_root'),
VERSION: '1.5.2.dev4',
VERSION: '1.5.2.dev5',
LANGUAGE: 'None',
COLLAPSE_INDEX: false,
BUILDER: 'html',
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53 changes: 53 additions & 0 deletions _static/style.css
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height: 100%;
}

blockquote {
margin: 0 0 4px !important;
}

code {
color: #49759c !important;
background-color: #f3f5f9 !important;
}

section {
text-align: justify;
}

.alert-info {
background-color: #adb8cb !important;
border-color: #adb8cb !important;
color: #2c3e50 !important;
}

.method {
border-top: 3px solid #d0d0d0;
padding-top: 10px;
}

.function dt {
padding-top: 150px;
margin-top: -150px;
-webkit-background-clip: content-box;
background-clip: content-box;
}

#sidebar {
text-overflow: ellipsis;
max-height: 80%;
overflow-y: auto;
}

/* Make the sidebar table of content more compact and with larger indent */
.bs-sidenav .nav .nav > li > a {
padding-left: 30px;
padding-top: 1px;
padding-bottom: 1px;
}
.bs-sidenav .nav .nav .nav > li > a {
padding-left: 50px;
padding-top: 1px;
padding-bottom: 1px;
}
.bs-sidenav .nav .nav .nav .nav > li > a {
padding-left: 70px;
padding-top: 1px;
padding-bottom: 1px;
}
.pre {
color: #D05336;
}
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5 changes: 3 additions & 2 deletions auto_examples/index.html
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<meta charset="utf-8" />
<meta name="viewport" content="width=device-width, initial-scale=1.0" /><meta name="generator" content="Docutils 0.17.1: http://docutils.sourceforge.net/" />

<title>Examples Gallery &#8212; benchopt 1.5.2.dev4 documentation</title>
<title>Examples Gallery &#8212; benchopt 1.5.2.dev5 documentation</title>



Expand Down Expand Up @@ -134,7 +134,7 @@
<script>document.write(`<img src="../_static/logo_benchopt.png" class="logo__image only-dark" alt="benchopt logo"/>`);</script>


<p class="title logo__title">1.5.2.dev4</p>
<p class="title logo__title">1.5.2.dev5</p>

</a></div>
<div class="sidebar-primary-item">
Expand Down Expand Up @@ -175,6 +175,7 @@
</ul>
</li>
<li class="toctree-l1 has-children"><a class="reference internal" href="../tutorials/index.html">Tutorials</a><input class="toctree-checkbox" id="toctree-checkbox-2" name="toctree-checkbox-2" type="checkbox"/><label class="toctree-toggle" for="toctree-checkbox-2"><i class="fa-solid fa-chevron-down"></i></label><ul>
<li class="toctree-l2"><a class="reference internal" href="../tutorials/build_benchmark.html">Understanding and building a simple benchmark</a></li>
<li class="toctree-l2"><a class="reference internal" href="../tutorials/add_solver.html">Add a solver to an existing benchmark</a></li>
</ul>
</li>
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12 changes: 8 additions & 4 deletions auto_examples/plot_run_benchmark.html
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<meta charset="utf-8" />
<meta name="viewport" content="width=device-width, initial-scale=1.0" /><meta name="generator" content="Docutils 0.17.1: http://docutils.sourceforge.net/" />

<title>Run benchmark from a script &#8212; benchopt 1.5.2.dev4 documentation</title>
<title>Run benchmark from a script &#8212; benchopt 1.5.2.dev5 documentation</title>



Expand Down Expand Up @@ -134,7 +134,7 @@
<script>document.write(`<img src="../_static/logo_benchopt.png" class="logo__image only-dark" alt="benchopt logo"/>`);</script>


<p class="title logo__title">1.5.2.dev4</p>
<p class="title logo__title">1.5.2.dev5</p>

</a></div>
<div class="sidebar-primary-item">
Expand Down Expand Up @@ -175,6 +175,7 @@
</ul>
</li>
<li class="toctree-l1 has-children"><a class="reference internal" href="../tutorials/index.html">Tutorials</a><input class="toctree-checkbox" id="toctree-checkbox-2" name="toctree-checkbox-2" type="checkbox"/><label class="toctree-toggle" for="toctree-checkbox-2"><i class="fa-solid fa-chevron-down"></i></label><ul>
<li class="toctree-l2"><a class="reference internal" href="../tutorials/build_benchmark.html">Understanding and building a simple benchmark</a></li>
<li class="toctree-l2"><a class="reference internal" href="../tutorials/add_solver.html">Add a solver to an existing benchmark</a></li>
</ul>
</li>
Expand Down Expand Up @@ -325,6 +326,7 @@ <h1>Run benchmark from a script</h1>
|--Lightning: 35.8% (1 / 15 reps)
|--Lightning: 43.2% (1 / 15 reps)
|--Lightning: 50.9% (1 / 15 reps)
|--Lightning: 61.6% (1 / 15 reps)
|--Lightning: initialization (2 / 15 reps)
|--Lightning: 0.0% (2 / 15 reps)
|--Lightning: 1.0% (2 / 15 reps)
Expand Down Expand Up @@ -402,6 +404,7 @@ <h1>Run benchmark from a script</h1>
|--Lightning: 35.8% (7 / 15 reps)
|--Lightning: 43.2% (7 / 15 reps)
|--Lightning: 50.9% (7 / 15 reps)
|--Lightning: 61.6% (7 / 15 reps)
|--Lightning: initialization (8 / 15 reps)
|--Lightning: 0.0% (8 / 15 reps)
|--Lightning: 1.0% (8 / 15 reps)
Expand Down Expand Up @@ -479,6 +482,7 @@ <h1>Run benchmark from a script</h1>
|--Lightning: 35.8% (13 / 15 reps)
|--Lightning: 43.2% (13 / 15 reps)
|--Lightning: 50.9% (13 / 15 reps)
|--Lightning: 61.6% (13 / 15 reps)
|--Lightning: initialization (14 / 15 reps)
|--Lightning: 0.0% (14 / 15 reps)
|--Lightning: 1.0% (14 / 15 reps)
Expand Down Expand Up @@ -823,7 +827,7 @@ <h1>Run benchmark from a script</h1>
|--sklearn[newton-cg]: 41.0% (15 / 15 reps)
|--sklearn[newton-cg]: 67.7% (15 / 15 reps)
|--sklearn[newton-cg]: done
Saving result in: /home/circleci/project/benchmarks/benchmark_logreg_l2/outputs/benchopt_run_2023-10-10_16h55m29.parquet
Saving result in: /home/circleci/project/benchmarks/benchmark_logreg_l2/outputs/benchopt_run_2023-10-30_16h27m31.parquet
Save objective_curve plot of objective_value for Simulated[n_features=500,n_samples=200] and L2 Logistic Regression[lmbd=1.0] as: /home/circleci/project/benchmarks/benchmark_logreg_l2/outputs/d1772497002e28b14c604350392ce9f7_objective_value_objective_curve.pdf
Save objective_curve plot of objective_Test loss for Simulated[n_features=500,n_samples=200] and L2 Logistic Regression[lmbd=1.0] as: /home/circleci/project/benchmarks/benchmark_logreg_l2/outputs/d1772497002e28b14c604350392ce9f7_objective_Test loss_objective_curve.pdf
Save suboptimality_curve plot of objective_value for Simulated[n_features=500,n_samples=200] and L2 Logistic Regression[lmbd=1.0] as: /home/circleci/project/benchmarks/benchmark_logreg_l2/outputs/d1772497002e28b14c604350392ce9f7_objective_value_suboptimality_curve.pdf
Expand Down Expand Up @@ -873,7 +877,7 @@ <h1>Run benchmark from a script</h1>
<a href="https://matplotlib.org/stable/api/_as_gen/matplotlib.pyplot.show.html#matplotlib.pyplot.show" title="matplotlib.pyplot.show" class="sphx-glr-backref-module-matplotlib-pyplot sphx-glr-backref-type-py-function"><span class="n">plt</span><span class="o">.</span><span class="n">show</span></a><span class="p">()</span>
</pre></div>
</div>
<p class="sphx-glr-timing"><strong>Total running time of the script:</strong> (0 minutes 45.573 seconds)</p>
<p class="sphx-glr-timing"><strong>Total running time of the script:</strong> (0 minutes 42.449 seconds)</p>
<div class="sphx-glr-footer sphx-glr-footer-example docutils container" id="sphx-glr-download-auto-examples-plot-run-benchmark-py">
<div class="sphx-glr-download sphx-glr-download-python docutils container">
<p><a class="reference download internal" download="" href="../_downloads/d0a19eddcd9b5cc19e309134ae758ece/plot_run_benchmark.py"><code class="xref download docutils literal notranslate"><span class="pre">Download</span> <span class="pre">Python</span> <span class="pre">source</span> <span class="pre">code:</span> <span class="pre">plot_run_benchmark.py</span></code></a></p>
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9 changes: 5 additions & 4 deletions auto_examples/plot_run_benchmark_python_R.html
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<meta charset="utf-8" />
<meta name="viewport" content="width=device-width, initial-scale=1.0" /><meta name="generator" content="Docutils 0.17.1: http://docutils.sourceforge.net/" />

<title>Demo benchmark with R/Python &#8212; benchopt 1.5.2.dev4 documentation</title>
<title>Demo benchmark with R/Python &#8212; benchopt 1.5.2.dev5 documentation</title>



Expand Down Expand Up @@ -134,7 +134,7 @@
<script>document.write(`<img src="../_static/logo_benchopt.png" class="logo__image only-dark" alt="benchopt logo"/>`);</script>


<p class="title logo__title">1.5.2.dev4</p>
<p class="title logo__title">1.5.2.dev5</p>

</a></div>
<div class="sidebar-primary-item">
Expand Down Expand Up @@ -175,6 +175,7 @@
</ul>
</li>
<li class="toctree-l1 has-children"><a class="reference internal" href="../tutorials/index.html">Tutorials</a><input class="toctree-checkbox" id="toctree-checkbox-2" name="toctree-checkbox-2" type="checkbox"/><label class="toctree-toggle" for="toctree-checkbox-2"><i class="fa-solid fa-chevron-down"></i></label><ul>
<li class="toctree-l2"><a class="reference internal" href="../tutorials/build_benchmark.html">Understanding and building a simple benchmark</a></li>
<li class="toctree-l2"><a class="reference internal" href="../tutorials/add_solver.html">Add a solver to an existing benchmark</a></li>
</ul>
</li>
Expand Down Expand Up @@ -316,7 +317,7 @@ <h1>Demo benchmark with R/Python</h1>
|--Lasso Regression[fit_intercept=False,reg=0.5]
|--Python-PGD[use_acceleration=False]: done
|--R-PGD: done (timeout)
Saving result in: /home/circleci/project/benchmarks/benchmark_lasso/outputs/benchopt_run_2023-10-10_16h54m43.parquet
Saving result in: /home/circleci/project/benchmarks/benchmark_lasso/outputs/benchopt_run_2023-10-30_16h26m47.parquet
Save objective_curve plot of objective_value for Simulated[n_features=5000,n_samples=100,rho=0] and Lasso Regression[fit_intercept=False,reg=0.5] as: /home/circleci/project/benchmarks/benchmark_lasso/outputs/3ebdde1738d5255ff1b6b4a7ea598289_objective_value_objective_curve.pdf
Save objective_curve plot of objective_support_size for Simulated[n_features=5000,n_samples=100,rho=0] and Lasso Regression[fit_intercept=False,reg=0.5] as: /home/circleci/project/benchmarks/benchmark_lasso/outputs/3ebdde1738d5255ff1b6b4a7ea598289_objective_support_size_objective_curve.pdf
Save objective_curve plot of objective_duality_gap for Simulated[n_features=5000,n_samples=100,rho=0] and Lasso Regression[fit_intercept=False,reg=0.5] as: /home/circleci/project/benchmarks/benchmark_lasso/outputs/3ebdde1738d5255ff1b6b4a7ea598289_objective_duality_gap_objective_curve.pdf
Expand Down Expand Up @@ -364,7 +365,7 @@ <h1>Demo benchmark with R/Python</h1>
<a href="https://matplotlib.org/stable/api/_as_gen/matplotlib.pyplot.show.html#matplotlib.pyplot.show" title="matplotlib.pyplot.show" class="sphx-glr-backref-module-matplotlib-pyplot sphx-glr-backref-type-py-function"><span class="n">plt</span><span class="o">.</span><span class="n">show</span></a><span class="p">()</span>
</pre></div>
</div>
<p class="sphx-glr-timing"><strong>Total running time of the script:</strong> (2 minutes 3.614 seconds)</p>
<p class="sphx-glr-timing"><strong>Total running time of the script:</strong> (2 minutes 9.969 seconds)</p>
<div class="sphx-glr-footer sphx-glr-footer-example docutils container" id="sphx-glr-download-auto-examples-plot-run-benchmark-python-r-py">
<div class="sphx-glr-download sphx-glr-download-python docutils container">
<p><a class="reference download internal" download="" href="../_downloads/46d3545d2de3fcee6756b7d2ee7fb39f/plot_run_benchmark_python_R.py"><code class="xref download docutils literal notranslate"><span class="pre">Download</span> <span class="pre">Python</span> <span class="pre">source</span> <span class="pre">code:</span> <span class="pre">plot_run_benchmark_python_R.py</span></code></a></p>
Expand Down
11 changes: 6 additions & 5 deletions auto_examples/sg_execution_times.html
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Expand Up @@ -9,7 +9,7 @@
<meta charset="utf-8" />
<meta name="viewport" content="width=device-width, initial-scale=1.0" /><meta name="generator" content="Docutils 0.17.1: http://docutils.sourceforge.net/" />

<title>Computation times &#8212; benchopt 1.5.2.dev4 documentation</title>
<title>Computation times &#8212; benchopt 1.5.2.dev5 documentation</title>



Expand Down Expand Up @@ -134,7 +134,7 @@
<script>document.write(`<img src="../_static/logo_benchopt.png" class="logo__image only-dark" alt="benchopt logo"/>`);</script>


<p class="title logo__title">1.5.2.dev4</p>
<p class="title logo__title">1.5.2.dev5</p>

</a></div>
<div class="sidebar-primary-item">
Expand Down Expand Up @@ -175,6 +175,7 @@
</ul>
</li>
<li class="toctree-l1 has-children"><a class="reference internal" href="../tutorials/index.html">Tutorials</a><input class="toctree-checkbox" id="toctree-checkbox-2" name="toctree-checkbox-2" type="checkbox"/><label class="toctree-toggle" for="toctree-checkbox-2"><i class="fa-solid fa-chevron-down"></i></label><ul>
<li class="toctree-l2"><a class="reference internal" href="../tutorials/build_benchmark.html">Understanding and building a simple benchmark</a></li>
<li class="toctree-l2"><a class="reference internal" href="../tutorials/add_solver.html">Add a solver to an existing benchmark</a></li>
</ul>
</li>
Expand Down Expand Up @@ -299,7 +300,7 @@ <h1>Computation times</h1>

<section id="computation-times">
<span id="sphx-glr-auto-examples-sg-execution-times"></span><h1>Computation times<a class="headerlink" href="#computation-times" title="Permalink to this headline">#</a></h1>
<p><strong>02:49.187</strong> total execution time for <strong>auto_examples</strong> files:</p>
<p><strong>02:52.418</strong> total execution time for <strong>auto_examples</strong> files:</p>
<table class="table">
<colgroup>
<col style="width: 84%" />
Expand All @@ -308,11 +309,11 @@ <h1>Computation times</h1>
</colgroup>
<tbody>
<tr class="row-odd"><td><p><a class="reference internal" href="plot_run_benchmark_python_R.html#sphx-glr-auto-examples-plot-run-benchmark-python-r-py"><span class="std std-ref">Demo benchmark with R/Python</span></a> (<code class="docutils literal notranslate"><span class="pre">plot_run_benchmark_python_R.py</span></code>)</p></td>
<td><p>02:03.614</p></td>
<td><p>02:09.969</p></td>
<td><p>0.0 MB</p></td>
</tr>
<tr class="row-even"><td><p><a class="reference internal" href="plot_run_benchmark.html#sphx-glr-auto-examples-plot-run-benchmark-py"><span class="std std-ref">Run benchmark from a script</span></a> (<code class="docutils literal notranslate"><span class="pre">plot_run_benchmark.py</span></code>)</p></td>
<td><p>00:45.573</p></td>
<td><p>00:42.449</p></td>
<td><p>0.0 MB</p></td>
</tr>
</tbody>
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5 changes: 3 additions & 2 deletions available_benchmarks.html
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<meta charset="utf-8" />
<meta name="viewport" content="width=device-width, initial-scale=1.0" /><meta name="generator" content="Docutils 0.17.1: http://docutils.sourceforge.net/" />

<title>Available benchmarks &#8212; benchopt 1.5.2.dev4 documentation</title>
<title>Available benchmarks &#8212; benchopt 1.5.2.dev5 documentation</title>



Expand Down Expand Up @@ -137,7 +137,7 @@
<script>document.write(`<img src="_static/logo_benchopt.png" class="logo__image only-dark" alt="benchopt logo"/>`);</script>


<p class="title logo__title">1.5.2.dev4</p>
<p class="title logo__title">1.5.2.dev5</p>

</a></div>
<div class="sidebar-primary-item">
Expand Down Expand Up @@ -178,6 +178,7 @@
</ul>
</li>
<li class="toctree-l1 has-children"><a class="reference internal" href="tutorials/index.html">Tutorials</a><input class="toctree-checkbox" id="toctree-checkbox-2" name="toctree-checkbox-2" type="checkbox"/><label class="toctree-toggle" for="toctree-checkbox-2"><i class="fa-solid fa-chevron-down"></i></label><ul>
<li class="toctree-l2"><a class="reference internal" href="tutorials/build_benchmark.html">Understanding and building a simple benchmark</a></li>
<li class="toctree-l2"><a class="reference internal" href="tutorials/add_solver.html">Add a solver to an existing benchmark</a></li>
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5 changes: 3 additions & 2 deletions benchmark_workflow/config_benchopt.html
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<meta charset="utf-8" />
<meta name="viewport" content="width=device-width, initial-scale=1.0" /><meta name="generator" content="Docutils 0.17.1: http://docutils.sourceforge.net/" />

<title>Configure Benchopt &#8212; benchopt 1.5.2.dev4 documentation</title>
<title>Configure Benchopt &#8212; benchopt 1.5.2.dev5 documentation</title>



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<script>document.write(`<img src="../_static/logo_benchopt.png" class="logo__image only-dark" alt="benchopt logo"/>`);</script>


<p class="title logo__title">1.5.2.dev4</p>
<p class="title logo__title">1.5.2.dev5</p>

</a></div>
<div class="sidebar-primary-item">
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<li class="toctree-l2"><a class="reference internal" href="../tutorials/build_benchmark.html">Understanding and building a simple benchmark</a></li>
<li class="toctree-l2"><a class="reference internal" href="../tutorials/add_solver.html">Add a solver to an existing benchmark</a></li>
</ul>
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