eQTL-LMT

Improving eQTL Analysis using a Machine Learning Approach for Data Integration: A Logistic Model Tree Solution

Prerequisites

• R
  • libraries: tools, MatrixEQTL, qtl, unbalanced
• Python2.7
• WEKA

Run

To run the pipeline run the bash script run_dream.sh specifying as input the WEKA classpath (path to 'weka.jar' file):

bash run_dream.sh <weka.jar>