Graph comparison ignoring URNs #287
Workflow file for this run
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
name: Parsers | |
on: [pull_request, push] | |
jobs: | |
run: | |
runs-on: ubuntu-latest | |
steps: | |
- uses: actions/checkout@master | |
- name: Setup Python | |
uses: actions/setup-python@master | |
with: | |
python-version: 3.10.6 | |
- name: Install dependencies | |
run: | | |
python -m pip install --upgrade pip | |
pip install pytest | |
pip install -r dev-requirements.txt | |
- name: Test SPM parser | |
run: | | |
curl -LJO https://raw.githubusercontent.com/incf-nidash/nidmresults-examples/master/spm_explicit_mask/batch.m | |
python -m bids_prov.spm.spm_parser --input_file batch.m --output_file explicit_mask.json | |
- name: Test FSL Parser | |
run: | | |
curl -LJO https://raw.githubusercontent.com/incf-nidash/nidmresults-examples/master/fsl_default/report_log.html | |
python -m bids_prov.fsl.fsl_parser --input_file report_log.html --output_file tests.json | |
- name: Test AFNI Parser | |
run: | | |
wget https://raw.githubusercontent.com/incf-nidash/nidmresults-examples/master/afni_default/subject_results/group.DS0011/subj.sub_001/proc.sub_001 | |
python -m bids_prov.afni.afni_parser --input_file proc.sub_001 --output_file tests.json |