Code

[INFRA] Convert entity table to yaml#475

Code

Merged

sappelhoff merged 53 commits intobids-standard:masterbids-standard/bids-specification:masterfrom tsalo:ref/json-entitytsalo/bids-specification:ref/json-entityCopy head branch name to clipboardAug 11, 2020

+990-38

Commits

Commits on May 16, 2020

• Draft entity and datatype files.

  tsalo

  committed
  18a3f24

• Draft more specifications.

  tsalo

  committed
  02c3403

• Add specifications for top-level files and directories.

  tsalo

  committed
  6ea0dfd

Commits on May 17, 2020

• Reorganize yaml files.

  tsalo

  committed
  6626368

Commits on May 19, 2020

• Add inclusion for top level files.

  tsalo

  committed
  5c26565

Commits on May 22, 2020

• Rename yaml files and add required field.

  tsalo

  committed
  d6601e7

• Convert dict to list in example file.

  tsalo

  committed
  ee9535f

• [DATALAD RUNCMD] Replace suffices with suffixes

  Show description for 56a42b6
  yarikoptic

  committed
  56a42b6

Commits on Jun 3, 2020

• Add leading "." to extensions to match specification.

  tsalo

  committed
  596ed00

• Convert dict to list.

  tsalo

  committed
  45fdfca

• Fix iEEG extension based on issue.

  tsalo

  committed
  9ec4e09

• Split auxdatatypes and drop datatypes key.

  tsalo

  committed
  d03d895

• Add descriptions to entities.

  tsalo

  committed
  8d3436c

• Draft metadata.

  tsalo

  committed
  aa1ac3e

Commits on Jun 10, 2020

• ENH: top level bids.yaml to bind all separate files together

  Show description for 5791baf
  yarikoptic

  committed
  5791baf

• ENH: initial version of tools/bids-schema to assist with producing materials using schema

  yarikoptic

  committed
  2193404

• RF: do not require !include - just load entire file tree!

  Show description for cc69735
  yarikoptic

  committed
  cc69735

• ENH: Produce entity table

  Show description for c41a0dc
  yarikoptic

  committed
  c41a0dc

Commits on Jun 11, 2020

• TEMP ENH: script to produce and replace the entity table inplace within .md

  yarikoptic

  committed
  797b23c

• ENH: a few more paths for git to ignore

  Show description for 56447c3
  yarikoptic

  committed
  56447c3

• [DATALAD RUNCMD] (Re)generate entity table from the schema

  Show description for 06429b5
  yarikoptic

  committed
  06429b5

Commits on Jun 13, 2020

• Revert aa1ac3e.

  tsalo

  committed
  e58931d

Commits on Jun 14, 2020

• Reorganize BIDS schema code.

  Show description for ef49d03
  tsalo

  committed
  ef49d03

• Add modality names.

  tsalo

  committed
  69b50fe

• Fix table header and allow run for anat.

  tsalo

  committed
  0673b73

• Add split entity.

  tsalo

  committed
  b11685d

Commits on Jun 15, 2020

• Switch from click to argparse.

  Show description for 8d0b612
  tsalo

  committed
  8d0b612

Commits on Jul 11, 2020

• Merge branch 'master' into ref/json-entity

  tsalo

  authored
  26f56ed

Commits on Jul 18, 2020

• Split entity table and add docstrings.

  tsalo

  committed
  0bacc04

• Merge branch 'ref/json-entity' of https://github.com/tsalo/bids-specification into ref/json-entity

  tsalo

  committed
  e2b923b

• Fix extra empty line.

  tsalo

  committed
  532bb6c

Commits on Jul 22, 2020

• Apply suggestions from code review

  Show description for 4041d00
  

  tsalo

  and

  effigies

  authored
  4041d00

• Remove top-level fieldmaps.

  tsalo

  committed
  bfac102

• Remove unsupported suffixes.

  tsalo

  committed
  6ce57e1

• Fix 4d MEG suffix.

  tsalo

  committed
  4e291e2

• Merge branch 'master' into ref/json-entity

  tsalo

  authored
  c9020f5

Commits on Jul 23, 2020

• Remove spurious trailing " in yaml paragraph

  Show description for bf80162
  

  yarikoptic

  and

  effigies

  authored
  bf80162

Commits on Jul 24, 2020

• Improve handling of multiline strings in yaml.

  tsalo

  committed
  37132a4

• Add comments to separate groups.

  tsalo

  committed
  814e453

• Draft schema instructions in CONTRIBUTING.md.

  tsalo

  committed
  0984f8c

Commits on Jul 26, 2020

• Partially address review.

  Show description for cab708a
  tsalo

  committed
  cab708a

• Apply suggestions from code review

  Show description for 8aa4994
  

  tsalo

  and

  nicholst

  authored
  8aa4994

Commits on Aug 2, 2020

• Drop unnecessary paths from .gitignore.

  tsalo

  committed
  592a0db

• Try adding schema test.

  tsalo

  committed
  1159d66

• Use -c.

  tsalo

  committed
  5576c66

• YAML isn't a builtin.

  tsalo

  committed
  330e4dc

• It's named pyyaml.

  tsalo

  committed
  a233116

• Fix linting issues in yaml files and fix test.

  tsalo

  committed
  85ba0ca

• Not a Python command.

  tsalo

  committed
  dd4e1c1

Commits on Aug 10, 2020

• Apply suggestions from code review

  Show description for 125c492
  

  tsalo

  and

  effigies

  authored
  125c492

• Implement changes from bids-standard#556.

  tsalo

  committed
  5c426b0

• Merge branch 'master' into ref/json-entity

  tsalo

  committed
  86650bf

Commits on Aug 11, 2020

• add LICENSE to top_level_files.yaml

  sappelhoff

  authored
  177b15a