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bio4j · Mar 7, 2014 · cfe0b1c · cfe0b1c
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diff --git a/docs/src/main/java/com/bio4j/neo4j/BasicEntity.java.md b/docs/src/main/java/com/bio4j/neo4j/BasicEntity.java.md
diff --git a/docs/src/main/java/com/bio4j/neo4j/BasicRelationship.java.md b/docs/src/main/java/com/bio4j/neo4j/BasicRelationship.java.md
diff --git a/docs/src/main/java/com/bio4j/neo4j/Neo4jManager.java.md b/docs/src/main/java/com/bio4j/neo4j/Neo4jManager.java.md
diff --git a/docs/src/main/java/com/bio4j/neo4j/codesamples/BiodieselProductionSample.java.md b/docs/src/main/java/com/bio4j/neo4j/codesamples/BiodieselProductionSample.java.md
diff --git a/docs/src/main/java/com/bio4j/neo4j/codesamples/GetEnzymeData.java.md b/docs/src/main/java/com/bio4j/neo4j/codesamples/GetEnzymeData.java.md
diff --git a/docs/src/main/java/com/bio4j/neo4j/codesamples/GetGOAnnotationsForOrganism.java.md b/docs/src/main/java/com/bio4j/neo4j/codesamples/GetGOAnnotationsForOrganism.java.md
diff --git a/docs/src/main/java/com/bio4j/neo4j/codesamples/GetGenesInfo.java.md b/docs/src/main/java/com/bio4j/neo4j/codesamples/GetGenesInfo.java.md
diff --git a/docs/src/main/java/com/bio4j/neo4j/codesamples/GetProteinsWithInterpro.java.md b/docs/src/main/java/com/bio4j/neo4j/codesamples/GetProteinsWithInterpro.java.md
diff --git a/docs/src/main/java/com/bio4j/neo4j/codesamples/RealUseCase1.java.md b/docs/src/main/java/com/bio4j/neo4j/codesamples/RealUseCase1.java.md
diff --git a/docs/src/main/java/com/bio4j/neo4j/codesamples/RetrieveProteinSample.java.md b/docs/src/main/java/com/bio4j/neo4j/codesamples/RetrieveProteinSample.java.md
diff --git a/docs/src/main/java/com/bio4j/neo4j/model/nodes/AlternativeProductNode.java.md b/docs/src/main/java/com/bio4j/neo4j/model/nodes/AlternativeProductNode.java.md
diff --git a/docs/src/main/java/com/bio4j/neo4j/model/nodes/CityNode.java.md b/docs/src/main/java/com/bio4j/neo4j/model/nodes/CityNode.java.md
diff --git a/docs/src/main/java/com/bio4j/neo4j/model/nodes/CommentTypeNode.java.md b/docs/src/main/java/com/bio4j/neo4j/model/nodes/CommentTypeNode.java.md
diff --git a/docs/src/main/java/com/bio4j/neo4j/model/nodes/ConsortiumNode.java.md b/docs/src/main/java/com/bio4j/neo4j/model/nodes/ConsortiumNode.java.md
diff --git a/docs/src/main/java/com/bio4j/neo4j/model/nodes/CountryNode.java.md b/docs/src/main/java/com/bio4j/neo4j/model/nodes/CountryNode.java.md
diff --git a/docs/src/main/java/com/bio4j/neo4j/model/nodes/DatasetNode.java.md b/docs/src/main/java/com/bio4j/neo4j/model/nodes/DatasetNode.java.md
diff --git a/docs/src/main/java/com/bio4j/neo4j/model/nodes/EnzymeNode.java.md b/docs/src/main/java/com/bio4j/neo4j/model/nodes/EnzymeNode.java.md
diff --git a/docs/src/main/java/com/bio4j/neo4j/model/nodes/FeatureTypeNode.java.md b/docs/src/main/java/com/bio4j/neo4j/model/nodes/FeatureTypeNode.java.md
diff --git a/docs/src/main/java/com/bio4j/neo4j/model/nodes/GoTermNode.java.md b/docs/src/main/java/com/bio4j/neo4j/model/nodes/GoTermNode.java.md
diff --git a/docs/src/main/java/com/bio4j/neo4j/model/nodes/InstituteNode.java.md b/docs/src/main/java/com/bio4j/neo4j/model/nodes/InstituteNode.java.md
diff --git a/docs/src/main/java/com/bio4j/neo4j/model/nodes/InterproNode.java.md b/docs/src/main/java/com/bio4j/neo4j/model/nodes/InterproNode.java.md
diff --git a/docs/src/main/java/com/bio4j/neo4j/model/nodes/IsoformNode.java.md b/docs/src/main/java/com/bio4j/neo4j/model/nodes/IsoformNode.java.md
diff --git a/docs/src/main/java/com/bio4j/neo4j/model/nodes/KeywordNode.java.md b/docs/src/main/java/com/bio4j/neo4j/model/nodes/KeywordNode.java.md
diff --git a/docs/src/main/java/com/bio4j/neo4j/model/nodes/OrganismNode.java.md b/docs/src/main/java/com/bio4j/neo4j/model/nodes/OrganismNode.java.md
diff --git a/docs/src/main/java/com/bio4j/neo4j/model/nodes/PersonNode.java.md b/docs/src/main/java/com/bio4j/neo4j/model/nodes/PersonNode.java.md
diff --git a/docs/src/main/java/com/bio4j/neo4j/model/nodes/PfamNode.java.md b/docs/src/main/java/com/bio4j/neo4j/model/nodes/PfamNode.java.md
diff --git a/docs/src/main/java/com/bio4j/neo4j/model/nodes/ProteinNode.java.md b/docs/src/main/java/com/bio4j/neo4j/model/nodes/ProteinNode.java.md
diff --git a/docs/src/main/java/com/bio4j/neo4j/model/nodes/SequenceCautionNode.java.md b/docs/src/main/java/com/bio4j/neo4j/model/nodes/SequenceCautionNode.java.md
diff --git a/docs/src/main/java/com/bio4j/neo4j/model/nodes/SubcellularLocationNode.java.md b/docs/src/main/java/com/bio4j/neo4j/model/nodes/SubcellularLocationNode.java.md
diff --git a/docs/src/main/java/com/bio4j/neo4j/model/nodes/TaxonNode.java.md b/docs/src/main/java/com/bio4j/neo4j/model/nodes/TaxonNode.java.md
diff --git a/docs/src/main/java/com/bio4j/neo4j/model/nodes/citation/ArticleNode.java.md b/docs/src/main/java/com/bio4j/neo4j/model/nodes/citation/ArticleNode.java.md
diff --git a/docs/src/main/java/com/bio4j/neo4j/model/nodes/citation/BookNode.java.md b/docs/src/main/java/com/bio4j/neo4j/model/nodes/citation/BookNode.java.md
diff --git a/docs/src/main/java/com/bio4j/neo4j/model/nodes/citation/DBNode.java.md b/docs/src/main/java/com/bio4j/neo4j/model/nodes/citation/DBNode.java.md
diff --git a/docs/src/main/java/com/bio4j/neo4j/model/nodes/citation/JournalNode.java.md b/docs/src/main/java/com/bio4j/neo4j/model/nodes/citation/JournalNode.java.md
diff --git a/docs/src/main/java/com/bio4j/neo4j/model/nodes/citation/OnlineArticleNode.java.md b/docs/src/main/java/com/bio4j/neo4j/model/nodes/citation/OnlineArticleNode.java.md
diff --git a/docs/src/main/java/com/bio4j/neo4j/model/nodes/citation/OnlineJournalNode.java.md b/docs/src/main/java/com/bio4j/neo4j/model/nodes/citation/OnlineJournalNode.java.md
diff --git a/docs/src/main/java/com/bio4j/neo4j/model/nodes/citation/PatentNode.java.md b/docs/src/main/java/com/bio4j/neo4j/model/nodes/citation/PatentNode.java.md
diff --git a/docs/src/main/java/com/bio4j/neo4j/model/nodes/citation/PublisherNode.java.md b/docs/src/main/java/com/bio4j/neo4j/model/nodes/citation/PublisherNode.java.md
diff --git a/docs/src/main/java/com/bio4j/neo4j/model/nodes/citation/SubmissionNode.java.md b/docs/src/main/java/com/bio4j/neo4j/model/nodes/citation/SubmissionNode.java.md
diff --git a/docs/src/main/java/com/bio4j/neo4j/model/nodes/citation/ThesisNode.java.md b/docs/src/main/java/com/bio4j/neo4j/model/nodes/citation/ThesisNode.java.md
diff --git a/...in/java/com/bio4j/neo4j/model/nodes/citation/UnpublishedObservationNode.java.md b/...in/java/com/bio4j/neo4j/model/nodes/citation/UnpublishedObservationNode.java.md
diff --git a/docs/src/main/java/com/bio4j/neo4j/model/nodes/ncbi/NCBITaxonNode.java.md b/docs/src/main/java/com/bio4j/neo4j/model/nodes/ncbi/NCBITaxonNode.java.md
diff --git a/docs/src/main/java/com/bio4j/neo4j/model/nodes/reactome/ReactomeTermNode.java.md b/docs/src/main/java/com/bio4j/neo4j/model/nodes/reactome/ReactomeTermNode.java.md
diff --git a/docs/src/main/java/com/bio4j/neo4j/model/nodes/refseq/CDSNode.java.md b/docs/src/main/java/com/bio4j/neo4j/model/nodes/refseq/CDSNode.java.md
diff --git a/docs/src/main/java/com/bio4j/neo4j/model/nodes/refseq/GeneNode.java.md b/docs/src/main/java/com/bio4j/neo4j/model/nodes/refseq/GeneNode.java.md
diff --git a/docs/src/main/java/com/bio4j/neo4j/model/nodes/refseq/GenomeElementNode.java.md b/docs/src/main/java/com/bio4j/neo4j/model/nodes/refseq/GenomeElementNode.java.md
diff --git a/docs/src/main/java/com/bio4j/neo4j/model/nodes/refseq/rna/MRNANode.java.md b/docs/src/main/java/com/bio4j/neo4j/model/nodes/refseq/rna/MRNANode.java.md
diff --git a/docs/src/main/java/com/bio4j/neo4j/model/nodes/refseq/rna/MiscRNANode.java.md b/docs/src/main/java/com/bio4j/neo4j/model/nodes/refseq/rna/MiscRNANode.java.md
diff --git a/docs/src/main/java/com/bio4j/neo4j/model/nodes/refseq/rna/NcRNANode.java.md b/docs/src/main/java/com/bio4j/neo4j/model/nodes/refseq/rna/NcRNANode.java.md
diff --git a/docs/src/main/java/com/bio4j/neo4j/model/nodes/refseq/rna/RNANode.java.md b/docs/src/main/java/com/bio4j/neo4j/model/nodes/refseq/rna/RNANode.java.md
diff --git a/docs/src/main/java/com/bio4j/neo4j/model/nodes/refseq/rna/RRNANode.java.md b/docs/src/main/java/com/bio4j/neo4j/model/nodes/refseq/rna/RRNANode.java.md
diff --git a/docs/src/main/java/com/bio4j/neo4j/model/nodes/refseq/rna/TRNANode.java.md b/docs/src/main/java/com/bio4j/neo4j/model/nodes/refseq/rna/TRNANode.java.md
diff --git a/docs/src/main/java/com/bio4j/neo4j/model/nodes/refseq/rna/TmRNANode.java.md b/docs/src/main/java/com/bio4j/neo4j/model/nodes/refseq/rna/TmRNANode.java.md
diff --git a/docs/src/main/java/com/bio4j/neo4j/model/relationships/InstituteCountryRel.java.md b/docs/src/main/java/com/bio4j/neo4j/model/relationships/InstituteCountryRel.java.md
diff --git a/.../main/java/com/bio4j/neo4j/model/relationships/IsoformEventGeneratorRel.java.md b/.../main/java/com/bio4j/neo4j/model/relationships/IsoformEventGeneratorRel.java.md
diff --git a/...n/java/com/bio4j/neo4j/model/relationships/SubcellularLocationParentRel.java.md b/...n/java/com/bio4j/neo4j/model/relationships/SubcellularLocationParentRel.java.md
diff --git a/docs/src/main/java/com/bio4j/neo4j/model/relationships/TaxonParentRel.java.md b/docs/src/main/java/com/bio4j/neo4j/model/relationships/TaxonParentRel.java.md
diff --git a/...o4j/neo4j/model/relationships/aproducts/AlternativeProductInitiationRel.java.md b/...o4j/neo4j/model/relationships/aproducts/AlternativeProductInitiationRel.java.md
diff --git a/...bio4j/neo4j/model/relationships/aproducts/AlternativeProductPromoterRel.java.md b/...bio4j/neo4j/model/relationships/aproducts/AlternativeProductPromoterRel.java.md
diff --git a/...del/relationships/aproducts/AlternativeProductRibosomalFrameshiftingRel.java.md b/...del/relationships/aproducts/AlternativeProductRibosomalFrameshiftingRel.java.md
diff --git a/...bio4j/neo4j/model/relationships/aproducts/AlternativeProductSplicingRel.java.md b/...bio4j/neo4j/model/relationships/aproducts/AlternativeProductSplicingRel.java.md
diff --git a/...a/com/bio4j/neo4j/model/relationships/citation/article/ArticleAuthorRel.java.md b/...a/com/bio4j/neo4j/model/relationships/citation/article/ArticleAuthorRel.java.md
diff --git a/.../com/bio4j/neo4j/model/relationships/citation/article/ArticleJournalRel.java.md b/.../com/bio4j/neo4j/model/relationships/citation/article/ArticleJournalRel.java.md
diff --git a/...4j/neo4j/model/relationships/citation/article/ArticleProteinCitationRel.java.md b/...4j/neo4j/model/relationships/citation/article/ArticleProteinCitationRel.java.md
diff --git a/...in/java/com/bio4j/neo4j/model/relationships/citation/book/BookAuthorRel.java.md b/...in/java/com/bio4j/neo4j/model/relationships/citation/book/BookAuthorRel.java.md
diff --git a/...main/java/com/bio4j/neo4j/model/relationships/citation/book/BookCityRel.java.md b/...main/java/com/bio4j/neo4j/model/relationships/citation/book/BookCityRel.java.md
diff --git a/...in/java/com/bio4j/neo4j/model/relationships/citation/book/BookEditorRel.java.md b/...in/java/com/bio4j/neo4j/model/relationships/citation/book/BookEditorRel.java.md
diff --git a/...om/bio4j/neo4j/model/relationships/citation/book/BookProteinCitationRel.java.md b/...om/bio4j/neo4j/model/relationships/citation/book/BookProteinCitationRel.java.md
diff --git a/...java/com/bio4j/neo4j/model/relationships/citation/book/BookPublisherRel.java.md b/...java/com/bio4j/neo4j/model/relationships/citation/book/BookPublisherRel.java.md
diff --git a/...o4j/neo4j/model/relationships/citation/onarticle/OnlineArticleAuthorRel.java.md b/...o4j/neo4j/model/relationships/citation/onarticle/OnlineArticleAuthorRel.java.md
diff --git a/...4j/neo4j/model/relationships/citation/onarticle/OnlineArticleJournalRel.java.md b/...4j/neo4j/model/relationships/citation/onarticle/OnlineArticleJournalRel.java.md
diff --git a/.../model/relationships/citation/onarticle/OnlineArticleProteinCitationRel.java.md b/.../model/relationships/citation/onarticle/OnlineArticleProteinCitationRel.java.md
diff --git a/...ava/com/bio4j/neo4j/model/relationships/citation/patent/PatentAuthorRel.java.md b/...ava/com/bio4j/neo4j/model/relationships/citation/patent/PatentAuthorRel.java.md
diff --git a/...io4j/neo4j/model/relationships/citation/patent/PatentProteinCitationRel.java.md b/...io4j/neo4j/model/relationships/citation/patent/PatentProteinCitationRel.java.md
diff --git a/...bio4j/neo4j/model/relationships/citation/submission/SubmissionAuthorRel.java.md b/...bio4j/neo4j/model/relationships/citation/submission/SubmissionAuthorRel.java.md
diff --git a/...com/bio4j/neo4j/model/relationships/citation/submission/SubmissionDbRel.java.md b/...com/bio4j/neo4j/model/relationships/citation/submission/SubmissionDbRel.java.md
diff --git a/...4j/model/relationships/citation/submission/SubmissionProteinCitationRel.java.md b/...4j/model/relationships/citation/submission/SubmissionProteinCitationRel.java.md
diff --git a/...ava/com/bio4j/neo4j/model/relationships/citation/thesis/ThesisAuthorRel.java.md b/...ava/com/bio4j/neo4j/model/relationships/citation/thesis/ThesisAuthorRel.java.md
diff --git a/.../com/bio4j/neo4j/model/relationships/citation/thesis/ThesisInstituteRel.java.md b/.../com/bio4j/neo4j/model/relationships/citation/thesis/ThesisInstituteRel.java.md
diff --git a/...io4j/neo4j/model/relationships/citation/thesis/ThesisProteinCitationRel.java.md b/...io4j/neo4j/model/relationships/citation/thesis/ThesisProteinCitationRel.java.md
diff --git a/...j/neo4j/model/relationships/citation/uo/UnpublishedObservationAuthorRel.java.md b/...j/neo4j/model/relationships/citation/uo/UnpublishedObservationAuthorRel.java.md
diff --git a/...odel/relationships/citation/uo/UnpublishedObservationProteinCitationRel.java.md b/...odel/relationships/citation/uo/UnpublishedObservationProteinCitationRel.java.md
diff --git a/...ain/java/com/bio4j/neo4j/model/relationships/comment/AllergenCommentRel.java.md b/...ain/java/com/bio4j/neo4j/model/relationships/comment/AllergenCommentRel.java.md
diff --git a/...c/main/java/com/bio4j/neo4j/model/relationships/comment/BasicCommentRel.java.md b/...c/main/java/com/bio4j/neo4j/model/relationships/comment/BasicCommentRel.java.md
diff --git a/...eo4j/model/relationships/comment/BioPhysicoChemicalPropertiesCommentRel.java.md b/...eo4j/model/relationships/comment/BioPhysicoChemicalPropertiesCommentRel.java.md
diff --git a/...ava/com/bio4j/neo4j/model/relationships/comment/BiotechnologyCommentRel.java.md b/...ava/com/bio4j/neo4j/model/relationships/comment/BiotechnologyCommentRel.java.md
diff --git a/...com/bio4j/neo4j/model/relationships/comment/CatalyticActivityCommentRel.java.md b/...com/bio4j/neo4j/model/relationships/comment/CatalyticActivityCommentRel.java.md
diff --git a/...main/java/com/bio4j/neo4j/model/relationships/comment/CautionCommentRel.java.md b/...main/java/com/bio4j/neo4j/model/relationships/comment/CautionCommentRel.java.md
diff --git a/...ain/java/com/bio4j/neo4j/model/relationships/comment/CofactorCommentRel.java.md b/...ain/java/com/bio4j/neo4j/model/relationships/comment/CofactorCommentRel.java.md
diff --git a/...om/bio4j/neo4j/model/relationships/comment/DevelopmentalStageCommentRel.java.md b/...om/bio4j/neo4j/model/relationships/comment/DevelopmentalStageCommentRel.java.md
diff --git a/...main/java/com/bio4j/neo4j/model/relationships/comment/DiseaseCommentRel.java.md b/...main/java/com/bio4j/neo4j/model/relationships/comment/DiseaseCommentRel.java.md
diff --git a/...m/bio4j/neo4j/model/relationships/comment/DisruptionPhenotypeCommentRel.java.md b/...m/bio4j/neo4j/model/relationships/comment/DisruptionPhenotypeCommentRel.java.md
diff --git a/.../main/java/com/bio4j/neo4j/model/relationships/comment/DomainCommentRel.java.md b/.../main/java/com/bio4j/neo4j/model/relationships/comment/DomainCommentRel.java.md
diff --git a/.../com/bio4j/neo4j/model/relationships/comment/EnzymeRegulationCommentRel.java.md b/.../com/bio4j/neo4j/model/relationships/comment/EnzymeRegulationCommentRel.java.md
diff --git a/...ain/java/com/bio4j/neo4j/model/relationships/comment/FunctionCommentRel.java.md b/...ain/java/com/bio4j/neo4j/model/relationships/comment/FunctionCommentRel.java.md
diff --git a/...in/java/com/bio4j/neo4j/model/relationships/comment/InductionCommentRel.java.md b/...in/java/com/bio4j/neo4j/model/relationships/comment/InductionCommentRel.java.md
diff --git a/.../com/bio4j/neo4j/model/relationships/comment/MassSpectrometryCommentRel.java.md b/.../com/bio4j/neo4j/model/relationships/comment/MassSpectrometryCommentRel.java.md
diff --git a/...ava/com/bio4j/neo4j/model/relationships/comment/MiscellaneousCommentRel.java.md b/...ava/com/bio4j/neo4j/model/relationships/comment/MiscellaneousCommentRel.java.md
diff --git a/...com/bio4j/neo4j/model/relationships/comment/OnlineInformationCommentRel.java.md b/...com/bio4j/neo4j/model/relationships/comment/OnlineInformationCommentRel.java.md
diff --git a/...main/java/com/bio4j/neo4j/model/relationships/comment/PathwayCommentRel.java.md b/...main/java/com/bio4j/neo4j/model/relationships/comment/PathwayCommentRel.java.md
diff --git a/...va/com/bio4j/neo4j/model/relationships/comment/PharmaceuticalCommentRel.java.md b/...va/com/bio4j/neo4j/model/relationships/comment/PharmaceuticalCommentRel.java.md
diff --git a/...java/com/bio4j/neo4j/model/relationships/comment/PolymorphismCommentRel.java.md b/...java/com/bio4j/neo4j/model/relationships/comment/PolymorphismCommentRel.java.md
diff --git a/...o4j/model/relationships/comment/PostTranslationalModificationCommentRel.java.md b/...o4j/model/relationships/comment/PostTranslationalModificationCommentRel.java.md
diff --git a/...n/java/com/bio4j/neo4j/model/relationships/comment/RnaEditingCommentRel.java.md b/...n/java/com/bio4j/neo4j/model/relationships/comment/RnaEditingCommentRel.java.md
diff --git a/...n/java/com/bio4j/neo4j/model/relationships/comment/SimilarityCommentRel.java.md b/...n/java/com/bio4j/neo4j/model/relationships/comment/SimilarityCommentRel.java.md
diff --git a/...main/java/com/bio4j/neo4j/model/relationships/comment/SubunitCommentRel.java.md b/...main/java/com/bio4j/neo4j/model/relationships/comment/SubunitCommentRel.java.md
diff --git a/...com/bio4j/neo4j/model/relationships/comment/TissueSpecificityCommentRel.java.md b/...com/bio4j/neo4j/model/relationships/comment/TissueSpecificityCommentRel.java.md
diff --git a/...in/java/com/bio4j/neo4j/model/relationships/comment/ToxicDoseCommentRel.java.md b/...in/java/com/bio4j/neo4j/model/relationships/comment/ToxicDoseCommentRel.java.md
diff --git a/.../java/com/bio4j/neo4j/model/relationships/features/ActiveSiteFeatureRel.java.md b/.../java/com/bio4j/neo4j/model/relationships/features/ActiveSiteFeatureRel.java.md
diff --git a/.../main/java/com/bio4j/neo4j/model/relationships/features/BasicFeatureRel.java.md b/.../main/java/com/bio4j/neo4j/model/relationships/features/BasicFeatureRel.java.md
diff --git a/...java/com/bio4j/neo4j/model/relationships/features/BindingSiteFeatureRel.java.md b/...java/com/bio4j/neo4j/model/relationships/features/BindingSiteFeatureRel.java.md
diff --git a/...bio4j/neo4j/model/relationships/features/CalciumBindingRegionFeatureRel.java.md b/...bio4j/neo4j/model/relationships/features/CalciumBindingRegionFeatureRel.java.md
diff --git a/.../main/java/com/bio4j/neo4j/model/relationships/features/ChainFeatureRel.java.md b/.../main/java/com/bio4j/neo4j/model/relationships/features/ChainFeatureRel.java.md
diff --git a/...com/bio4j/neo4j/model/relationships/features/CoiledCoilRegionFeatureRel.java.md b/...com/bio4j/neo4j/model/relationships/features/CoiledCoilRegionFeatureRel.java.md
diff --git a/...eo4j/model/relationships/features/CompositionallyBiasedRegionFeatureRel.java.md b/...eo4j/model/relationships/features/CompositionallyBiasedRegionFeatureRel.java.md
diff --git a/...n/java/com/bio4j/neo4j/model/relationships/features/CrossLinkFeatureRel.java.md b/...n/java/com/bio4j/neo4j/model/relationships/features/CrossLinkFeatureRel.java.md
diff --git a/...va/com/bio4j/neo4j/model/relationships/features/DisulfideBondFeatureRel.java.md b/...va/com/bio4j/neo4j/model/relationships/features/DisulfideBondFeatureRel.java.md
diff --git a/...com/bio4j/neo4j/model/relationships/features/DnaBindingRegionFeatureRel.java.md b/...com/bio4j/neo4j/model/relationships/features/DnaBindingRegionFeatureRel.java.md
diff --git a/...main/java/com/bio4j/neo4j/model/relationships/features/DomainFeatureRel.java.md b/...main/java/com/bio4j/neo4j/model/relationships/features/DomainFeatureRel.java.md
diff --git a/...om/bio4j/neo4j/model/relationships/features/GlycosylationSiteFeatureRel.java.md b/...om/bio4j/neo4j/model/relationships/features/GlycosylationSiteFeatureRel.java.md
diff --git a/.../main/java/com/bio4j/neo4j/model/relationships/features/HelixFeatureRel.java.md b/.../main/java/com/bio4j/neo4j/model/relationships/features/HelixFeatureRel.java.md
diff --git a/.../bio4j/neo4j/model/relationships/features/InitiatorMethionineFeatureRel.java.md b/.../bio4j/neo4j/model/relationships/features/InitiatorMethionineFeatureRel.java.md
diff --git a/.../bio4j/neo4j/model/relationships/features/IntramembraneRegionFeatureRel.java.md b/.../bio4j/neo4j/model/relationships/features/IntramembraneRegionFeatureRel.java.md
diff --git a/...j/neo4j/model/relationships/features/LipidMoietyBindingRegionFeatureRel.java.md b/...j/neo4j/model/relationships/features/LipidMoietyBindingRegionFeatureRel.java.md
diff --git a/.../bio4j/neo4j/model/relationships/features/MetalIonBindingSiteFeatureRel.java.md b/.../bio4j/neo4j/model/relationships/features/MetalIonBindingSiteFeatureRel.java.md
diff --git a/.../com/bio4j/neo4j/model/relationships/features/ModifiedResidueFeatureRel.java.md b/.../com/bio4j/neo4j/model/relationships/features/ModifiedResidueFeatureRel.java.md
diff --git a/.../com/bio4j/neo4j/model/relationships/features/MutagenesisSiteFeatureRel.java.md b/.../com/bio4j/neo4j/model/relationships/features/MutagenesisSiteFeatureRel.java.md
diff --git a/...o4j/neo4j/model/relationships/features/NonConsecutiveResiduesFeatureRel.java.md b/...o4j/neo4j/model/relationships/features/NonConsecutiveResiduesFeatureRel.java.md
diff --git a/...bio4j/neo4j/model/relationships/features/NonStandardAminoAcidFeatureRel.java.md b/...bio4j/neo4j/model/relationships/features/NonStandardAminoAcidFeatureRel.java.md
diff --git a/...m/bio4j/neo4j/model/relationships/features/NonTerminalResidueFeatureRel.java.md b/...m/bio4j/neo4j/model/relationships/features/NonTerminalResidueFeatureRel.java.md
diff --git a/...model/relationships/features/NucleotidePhosphateBindingRegionFeatureRel.java.md b/...model/relationships/features/NucleotidePhosphateBindingRegionFeatureRel.java.md
diff --git a/...ain/java/com/bio4j/neo4j/model/relationships/features/PeptideFeatureRel.java.md b/...ain/java/com/bio4j/neo4j/model/relationships/features/PeptideFeatureRel.java.md
diff --git a/.../java/com/bio4j/neo4j/model/relationships/features/PropeptideFeatureRel.java.md b/.../java/com/bio4j/neo4j/model/relationships/features/PropeptideFeatureRel.java.md
diff --git a/...com/bio4j/neo4j/model/relationships/features/RegionOfInterestFeatureRel.java.md b/...com/bio4j/neo4j/model/relationships/features/RegionOfInterestFeatureRel.java.md
diff --git a/...main/java/com/bio4j/neo4j/model/relationships/features/RepeatFeatureRel.java.md b/...main/java/com/bio4j/neo4j/model/relationships/features/RepeatFeatureRel.java.md
diff --git a/...com/bio4j/neo4j/model/relationships/features/SequenceConflictFeatureRel.java.md b/...com/bio4j/neo4j/model/relationships/features/SequenceConflictFeatureRel.java.md
diff --git a/.../com/bio4j/neo4j/model/relationships/features/SequenceVariantFeatureRel.java.md b/.../com/bio4j/neo4j/model/relationships/features/SequenceVariantFeatureRel.java.md
diff --git a/...m/bio4j/neo4j/model/relationships/features/ShortSequenceMotifFeatureRel.java.md b/...m/bio4j/neo4j/model/relationships/features/ShortSequenceMotifFeatureRel.java.md
diff --git a/...va/com/bio4j/neo4j/model/relationships/features/SignalPeptideFeatureRel.java.md b/...va/com/bio4j/neo4j/model/relationships/features/SignalPeptideFeatureRel.java.md
diff --git a/...c/main/java/com/bio4j/neo4j/model/relationships/features/SiteFeatureRel.java.md b/...c/main/java/com/bio4j/neo4j/model/relationships/features/SiteFeatureRel.java.md
diff --git a/...va/com/bio4j/neo4j/model/relationships/features/SpliceVariantFeatureRel.java.md b/...va/com/bio4j/neo4j/model/relationships/features/SpliceVariantFeatureRel.java.md
diff --git a/...main/java/com/bio4j/neo4j/model/relationships/features/StrandFeatureRel.java.md b/...main/java/com/bio4j/neo4j/model/relationships/features/StrandFeatureRel.java.md
diff --git a/...om/bio4j/neo4j/model/relationships/features/TopologicalDomainFeatureRel.java.md b/...om/bio4j/neo4j/model/relationships/features/TopologicalDomainFeatureRel.java.md
diff --git a/...a/com/bio4j/neo4j/model/relationships/features/TransitPeptideFeatureRel.java.md b/...a/com/bio4j/neo4j/model/relationships/features/TransitPeptideFeatureRel.java.md
diff --git a/.../bio4j/neo4j/model/relationships/features/TransmembraneRegionFeatureRel.java.md b/.../bio4j/neo4j/model/relationships/features/TransmembraneRegionFeatureRel.java.md
diff --git a/...c/main/java/com/bio4j/neo4j/model/relationships/features/TurnFeatureRel.java.md b/...c/main/java/com/bio4j/neo4j/model/relationships/features/TurnFeatureRel.java.md
diff --git a/...va/com/bio4j/neo4j/model/relationships/features/UnsureResidueFeatureRel.java.md b/...va/com/bio4j/neo4j/model/relationships/features/UnsureResidueFeatureRel.java.md
diff --git a/...com/bio4j/neo4j/model/relationships/features/ZincFingerRegionFeatureRel.java.md b/...com/bio4j/neo4j/model/relationships/features/ZincFingerRegionFeatureRel.java.md
diff --git a/...c/main/java/com/bio4j/neo4j/model/relationships/go/BiologicalProcessRel.java.md b/...c/main/java/com/bio4j/neo4j/model/relationships/go/BiologicalProcessRel.java.md
diff --git a/...c/main/java/com/bio4j/neo4j/model/relationships/go/CellularComponentRel.java.md b/...c/main/java/com/bio4j/neo4j/model/relationships/go/CellularComponentRel.java.md
diff --git a/docs/src/main/java/com/bio4j/neo4j/model/relationships/go/HasPartOfGoRel.java.md b/docs/src/main/java/com/bio4j/neo4j/model/relationships/go/HasPartOfGoRel.java.md
diff --git a/docs/src/main/java/com/bio4j/neo4j/model/relationships/go/IsAGoRel.java.md b/docs/src/main/java/com/bio4j/neo4j/model/relationships/go/IsAGoRel.java.md
diff --git a/docs/src/main/java/com/bio4j/neo4j/model/relationships/go/MainGoRel.java.md b/docs/src/main/java/com/bio4j/neo4j/model/relationships/go/MainGoRel.java.md
diff --git a/...c/main/java/com/bio4j/neo4j/model/relationships/go/MolecularFunctionRel.java.md b/...c/main/java/com/bio4j/neo4j/model/relationships/go/MolecularFunctionRel.java.md
diff --git a/...in/java/com/bio4j/neo4j/model/relationships/go/NegativelyRegulatesGoRel.java.md b/...in/java/com/bio4j/neo4j/model/relationships/go/NegativelyRegulatesGoRel.java.md
diff --git a/docs/src/main/java/com/bio4j/neo4j/model/relationships/go/PartOfGoRel.java.md b/docs/src/main/java/com/bio4j/neo4j/model/relationships/go/PartOfGoRel.java.md
diff --git a/...in/java/com/bio4j/neo4j/model/relationships/go/PositivelyRegulatesGoRel.java.md b/...in/java/com/bio4j/neo4j/model/relationships/go/PositivelyRegulatesGoRel.java.md
diff --git a/docs/src/main/java/com/bio4j/neo4j/model/relationships/go/RegulatesGoRel.java.md b/docs/src/main/java/com/bio4j/neo4j/model/relationships/go/RegulatesGoRel.java.md
diff --git a/...src/main/java/com/bio4j/neo4j/model/relationships/ncbi/NCBIMainTaxonRel.java.md b/...src/main/java/com/bio4j/neo4j/model/relationships/ncbi/NCBIMainTaxonRel.java.md
diff --git a/...c/main/java/com/bio4j/neo4j/model/relationships/ncbi/NCBITaxonParentRel.java.md b/...c/main/java/com/bio4j/neo4j/model/relationships/ncbi/NCBITaxonParentRel.java.md
diff --git a/docs/src/main/java/com/bio4j/neo4j/model/relationships/ncbi/NCBITaxonRel.java.md b/docs/src/main/java/com/bio4j/neo4j/model/relationships/ncbi/NCBITaxonRel.java.md
diff --git a/.../bio4j/neo4j/model/relationships/protein/BasicProteinSequenceCautionRel.java.md b/.../bio4j/neo4j/model/relationships/protein/BasicProteinSequenceCautionRel.java.md
diff --git a/...main/java/com/bio4j/neo4j/model/relationships/protein/ProteinDatasetRel.java.md b/...main/java/com/bio4j/neo4j/model/relationships/protein/ProteinDatasetRel.java.md
diff --git a/...com/bio4j/neo4j/model/relationships/protein/ProteinEnzymaticActivityRel.java.md b/...com/bio4j/neo4j/model/relationships/protein/ProteinEnzymaticActivityRel.java.md
diff --git a/...eo4j/model/relationships/protein/ProteinErroneousGeneModelPredictionRel.java.md b/...eo4j/model/relationships/protein/ProteinErroneousGeneModelPredictionRel.java.md
diff --git a/...m/bio4j/neo4j/model/relationships/protein/ProteinErroneousInitiationRel.java.md b/...m/bio4j/neo4j/model/relationships/protein/ProteinErroneousInitiationRel.java.md
diff --git a/.../bio4j/neo4j/model/relationships/protein/ProteinErroneousTerminationRel.java.md b/.../bio4j/neo4j/model/relationships/protein/ProteinErroneousTerminationRel.java.md
diff --git a/.../bio4j/neo4j/model/relationships/protein/ProteinErroneousTranslationRel.java.md b/.../bio4j/neo4j/model/relationships/protein/ProteinErroneousTranslationRel.java.md
diff --git a/...n/java/com/bio4j/neo4j/model/relationships/protein/ProteinFrameshiftRel.java.md b/...n/java/com/bio4j/neo4j/model/relationships/protein/ProteinFrameshiftRel.java.md
diff --git a/...ava/com/bio4j/neo4j/model/relationships/protein/ProteinGenomeElementRel.java.md b/...ava/com/bio4j/neo4j/model/relationships/protein/ProteinGenomeElementRel.java.md
diff --git a/.../src/main/java/com/bio4j/neo4j/model/relationships/protein/ProteinGoRel.java.md b/.../src/main/java/com/bio4j/neo4j/model/relationships/protein/ProteinGoRel.java.md
diff --git a/...ain/java/com/bio4j/neo4j/model/relationships/protein/ProteinInterproRel.java.md b/...ain/java/com/bio4j/neo4j/model/relationships/protein/ProteinInterproRel.java.md
diff --git a/...om/bio4j/neo4j/model/relationships/protein/ProteinIsoformInteractionRel.java.md b/...om/bio4j/neo4j/model/relationships/protein/ProteinIsoformInteractionRel.java.md
diff --git a/...main/java/com/bio4j/neo4j/model/relationships/protein/ProteinIsoformRel.java.md b/...main/java/com/bio4j/neo4j/model/relationships/protein/ProteinIsoformRel.java.md
diff --git a/...main/java/com/bio4j/neo4j/model/relationships/protein/ProteinKeywordRel.java.md b/...main/java/com/bio4j/neo4j/model/relationships/protein/ProteinKeywordRel.java.md
diff --git a/...4j/neo4j/model/relationships/protein/ProteinMiscellaneousDiscrepancyRel.java.md b/...4j/neo4j/model/relationships/protein/ProteinMiscellaneousDiscrepancyRel.java.md
diff --git a/...ain/java/com/bio4j/neo4j/model/relationships/protein/ProteinOrganismRel.java.md b/...ain/java/com/bio4j/neo4j/model/relationships/protein/ProteinOrganismRel.java.md
diff --git a/...rc/main/java/com/bio4j/neo4j/model/relationships/protein/ProteinPfamRel.java.md b/...rc/main/java/com/bio4j/neo4j/model/relationships/protein/ProteinPfamRel.java.md
diff --git a/...om/bio4j/neo4j/model/relationships/protein/ProteinProteinInteractionRel.java.md b/...om/bio4j/neo4j/model/relationships/protein/ProteinProteinInteractionRel.java.md
diff --git a/...ain/java/com/bio4j/neo4j/model/relationships/protein/ProteinReactomeRel.java.md b/...ain/java/com/bio4j/neo4j/model/relationships/protein/ProteinReactomeRel.java.md
diff --git a/...m/bio4j/neo4j/model/relationships/protein/ProteinSubcellularLocationRel.java.md b/...m/bio4j/neo4j/model/relationships/protein/ProteinSubcellularLocationRel.java.md
diff --git a/...ain/java/com/bio4j/neo4j/model/relationships/refseq/GenomeElementCDSRel.java.md b/...ain/java/com/bio4j/neo4j/model/relationships/refseq/GenomeElementCDSRel.java.md
diff --git a/...in/java/com/bio4j/neo4j/model/relationships/refseq/GenomeElementGeneRel.java.md b/...in/java/com/bio4j/neo4j/model/relationships/refseq/GenomeElementGeneRel.java.md
diff --git a/...in/java/com/bio4j/neo4j/model/relationships/refseq/GenomeElementMRnaRel.java.md b/...in/java/com/bio4j/neo4j/model/relationships/refseq/GenomeElementMRnaRel.java.md
diff --git a/...java/com/bio4j/neo4j/model/relationships/refseq/GenomeElementMiscRnaRel.java.md b/...java/com/bio4j/neo4j/model/relationships/refseq/GenomeElementMiscRnaRel.java.md
diff --git a/...n/java/com/bio4j/neo4j/model/relationships/refseq/GenomeElementNcRnaRel.java.md b/...n/java/com/bio4j/neo4j/model/relationships/refseq/GenomeElementNcRnaRel.java.md
diff --git a/...in/java/com/bio4j/neo4j/model/relationships/refseq/GenomeElementRRnaRel.java.md b/...in/java/com/bio4j/neo4j/model/relationships/refseq/GenomeElementRRnaRel.java.md
diff --git a/...in/java/com/bio4j/neo4j/model/relationships/refseq/GenomeElementTRnaRel.java.md b/...in/java/com/bio4j/neo4j/model/relationships/refseq/GenomeElementTRnaRel.java.md
diff --git a/...n/java/com/bio4j/neo4j/model/relationships/refseq/GenomeElementTmRnaRel.java.md b/...n/java/com/bio4j/neo4j/model/relationships/refseq/GenomeElementTmRnaRel.java.md
diff --git a/.../com/bio4j/neo4j/model/relationships/sc/ErroneousGeneModelPredictionRel.java.md b/.../com/bio4j/neo4j/model/relationships/sc/ErroneousGeneModelPredictionRel.java.md
diff --git a/...main/java/com/bio4j/neo4j/model/relationships/sc/ErroneousInitiationRel.java.md b/...main/java/com/bio4j/neo4j/model/relationships/sc/ErroneousInitiationRel.java.md
diff --git a/...ain/java/com/bio4j/neo4j/model/relationships/sc/ErroneousTerminationRel.java.md b/...ain/java/com/bio4j/neo4j/model/relationships/sc/ErroneousTerminationRel.java.md
diff --git a/...ain/java/com/bio4j/neo4j/model/relationships/sc/ErroneousTranslationRel.java.md b/...ain/java/com/bio4j/neo4j/model/relationships/sc/ErroneousTranslationRel.java.md
diff --git a/docs/src/main/java/com/bio4j/neo4j/model/relationships/sc/FrameshiftRel.java.md b/docs/src/main/java/com/bio4j/neo4j/model/relationships/sc/FrameshiftRel.java.md
diff --git a/...java/com/bio4j/neo4j/model/relationships/sc/MiscellaneousDiscrepancyRel.java.md b/...java/com/bio4j/neo4j/model/relationships/sc/MiscellaneousDiscrepancyRel.java.md
diff --git a/...main/java/com/bio4j/neo4j/model/relationships/uniref/UniRef100MemberRel.java.md b/...main/java/com/bio4j/neo4j/model/relationships/uniref/UniRef100MemberRel.java.md
diff --git a/.../main/java/com/bio4j/neo4j/model/relationships/uniref/UniRef50MemberRel.java.md b/.../main/java/com/bio4j/neo4j/model/relationships/uniref/UniRef50MemberRel.java.md
diff --git a/.../main/java/com/bio4j/neo4j/model/relationships/uniref/UniRef90MemberRel.java.md b/.../main/java/com/bio4j/neo4j/model/relationships/uniref/UniRef90MemberRel.java.md
diff --git a/docs/src/main/java/com/bio4j/neo4j/model/util/Bio4jManager.java.md b/docs/src/main/java/com/bio4j/neo4j/model/util/Bio4jManager.java.md
diff --git a/docs/src/main/java/com/bio4j/neo4j/model/util/GoUtil.java.md b/docs/src/main/java/com/bio4j/neo4j/model/util/GoUtil.java.md
diff --git a/docs/src/main/java/com/bio4j/neo4j/model/util/NodeIndexer.java.md b/docs/src/main/java/com/bio4j/neo4j/model/util/NodeIndexer.java.md
diff --git a/docs/src/main/java/com/bio4j/neo4j/model/util/NodeRetriever.java.md b/docs/src/main/java/com/bio4j/neo4j/model/util/NodeRetriever.java.md
diff --git a/docs/src/main/java/com/bio4j/neo4j/model/util/UniprotStuff.java.md b/docs/src/main/java/com/bio4j/neo4j/model/util/UniprotStuff.java.md
diff --git a/docs/src/main/java/com/bio4j/neo4j/programs/GetProteinData.java.md b/docs/src/main/java/com/bio4j/neo4j/programs/GetProteinData.java.md
diff --git a/docs/src/main/java/com/bio4j/neo4j/programs/ImportEnzymeDB.java.md b/docs/src/main/java/com/bio4j/neo4j/programs/ImportEnzymeDB.java.md
diff --git a/docs/src/main/java/com/bio4j/neo4j/programs/ImportGeneOntology.java.md b/docs/src/main/java/com/bio4j/neo4j/programs/ImportGeneOntology.java.md
diff --git a/docs/src/main/java/com/bio4j/neo4j/programs/ImportIsoformSequences.java.md b/docs/src/main/java/com/bio4j/neo4j/programs/ImportIsoformSequences.java.md
diff --git a/docs/src/main/java/com/bio4j/neo4j/programs/ImportNCBITaxonomy.java.md b/docs/src/main/java/com/bio4j/neo4j/programs/ImportNCBITaxonomy.java.md
diff --git a/docs/src/main/java/com/bio4j/neo4j/programs/ImportNeo4jDB.java.md b/docs/src/main/java/com/bio4j/neo4j/programs/ImportNeo4jDB.java.md
diff --git a/docs/src/main/java/com/bio4j/neo4j/programs/ImportProteinInteractions.java.md b/docs/src/main/java/com/bio4j/neo4j/programs/ImportProteinInteractions.java.md
diff --git a/docs/src/main/java/com/bio4j/neo4j/programs/ImportRefSeq.java.md b/docs/src/main/java/com/bio4j/neo4j/programs/ImportRefSeq.java.md
diff --git a/docs/src/main/java/com/bio4j/neo4j/programs/ImportUniprot.java.md b/docs/src/main/java/com/bio4j/neo4j/programs/ImportUniprot.java.md
diff --git a/docs/src/main/java/com/bio4j/neo4j/programs/ImportUniref.java.md b/docs/src/main/java/com/bio4j/neo4j/programs/ImportUniref.java.md
diff --git a/docs/src/main/java/com/bio4j/neo4j/programs/IndexNCBITaxonomyByGiId.java.md b/docs/src/main/java/com/bio4j/neo4j/programs/IndexNCBITaxonomyByGiId.java.md
diff --git a/docs/src/main/java/com/bio4j/neo4j/programs/InitBio4jDB.java.md b/docs/src/main/java/com/bio4j/neo4j/programs/InitBio4jDB.java.md
diff --git a/docs/src/main/java/com/bio4j/neo4j/programs/UploadRefSeqSequencesToS3.java.md b/docs/src/main/java/com/bio4j/neo4j/programs/UploadRefSeqSequencesToS3.java.md
diff --git a/docs/src/main/java/com/ohnosequences/util/Executable.java.md b/docs/src/main/java/com/ohnosequences/util/Executable.java.md
diff --git a/docs/src/main/java/com/ohnosequences/util/ExecuteFromFile.java.md b/docs/src/main/java/com/ohnosequences/util/ExecuteFromFile.java.md
diff --git a/docs/src/main/java/com/ohnosequences/util/genbank/GBCommon.java.md b/docs/src/main/java/com/ohnosequences/util/genbank/GBCommon.java.md
diff --git a/docs/src/main/java/com/ohnosequences/xml/api/interfaces/IAttribute.java.md b/docs/src/main/java/com/ohnosequences/xml/api/interfaces/IAttribute.java.md
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diff --git a/docs/src/main/java/com/ohnosequences/xml/api/interfaces/INameSpace.java.md b/docs/src/main/java/com/ohnosequences/xml/api/interfaces/INameSpace.java.md
diff --git a/docs/src/main/java/com/ohnosequences/xml/api/interfaces/IXmlThing.java.md b/docs/src/main/java/com/ohnosequences/xml/api/interfaces/IXmlThing.java.md
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diff --git a/docs/src/main/java/com/ohnosequences/xml/model/bio4j/Bio4jNodeIndexXML.java.md b/docs/src/main/java/com/ohnosequences/xml/model/bio4j/Bio4jNodeIndexXML.java.md
diff --git a/docs/src/main/java/com/ohnosequences/xml/model/bio4j/Bio4jNodeXML.java.md b/docs/src/main/java/com/ohnosequences/xml/model/bio4j/Bio4jNodeXML.java.md
diff --git a/docs/src/main/java/com/ohnosequences/xml/model/bio4j/Bio4jPropertyXML.java.md b/docs/src/main/java/com/ohnosequences/xml/model/bio4j/Bio4jPropertyXML.java.md
diff --git a/...c/main/java/com/ohnosequences/xml/model/bio4j/Bio4jRelationshipIndexXML.java.md b/...c/main/java/com/ohnosequences/xml/model/bio4j/Bio4jRelationshipIndexXML.java.md
diff --git a/docs/src/main/java/com/ohnosequences/xml/model/bio4j/Bio4jRelationshipXML.java.md b/docs/src/main/java/com/ohnosequences/xml/model/bio4j/Bio4jRelationshipXML.java.md
diff --git a/docs/src/main/java/com/ohnosequences/xml/model/bio4j/UniprotDataXML.java.md b/docs/src/main/java/com/ohnosequences/xml/model/bio4j/UniprotDataXML.java.md
diff --git a/docs/src/main/java/com/ohnosequences/xml/model/go/GOSlimXML.java.md b/docs/src/main/java/com/ohnosequences/xml/model/go/GOSlimXML.java.md
diff --git a/docs/src/main/java/com/ohnosequences/xml/model/go/GoAnnotationXML.java.md b/docs/src/main/java/com/ohnosequences/xml/model/go/GoAnnotationXML.java.md
diff --git a/docs/src/main/java/com/ohnosequences/xml/model/go/GoTermXML.java.md b/docs/src/main/java/com/ohnosequences/xml/model/go/GoTermXML.java.md
diff --git a/docs/src/main/java/com/ohnosequences/xml/model/go/SlimSetXML.java.md b/docs/src/main/java/com/ohnosequences/xml/model/go/SlimSetXML.java.md
diff --git a/docs/src/main/java/com/ohnosequences/xml/model/uniprot/ArticleXML.java.md b/docs/src/main/java/com/ohnosequences/xml/model/uniprot/ArticleXML.java.md
diff --git a/docs/src/main/java/com/ohnosequences/xml/model/uniprot/CommentXML.java.md b/docs/src/main/java/com/ohnosequences/xml/model/uniprot/CommentXML.java.md
diff --git a/docs/src/main/java/com/ohnosequences/xml/model/uniprot/FeatureXML.java.md b/docs/src/main/java/com/ohnosequences/xml/model/uniprot/FeatureXML.java.md
diff --git a/docs/src/main/java/com/ohnosequences/xml/model/uniprot/InterproXML.java.md b/docs/src/main/java/com/ohnosequences/xml/model/uniprot/InterproXML.java.md
diff --git a/docs/src/main/java/com/ohnosequences/xml/model/uniprot/IsoformXML.java.md b/docs/src/main/java/com/ohnosequences/xml/model/uniprot/IsoformXML.java.md
diff --git a/docs/src/main/java/com/ohnosequences/xml/model/uniprot/KeywordXML.java.md b/docs/src/main/java/com/ohnosequences/xml/model/uniprot/KeywordXML.java.md
diff --git a/docs/src/main/java/com/ohnosequences/xml/model/uniprot/ProteinXML.java.md b/docs/src/main/java/com/ohnosequences/xml/model/uniprot/ProteinXML.java.md
diff --git a/...rc/main/java/com/ohnosequences/xml/model/uniprot/SubcellularLocationXML.java.md b/...rc/main/java/com/ohnosequences/xml/model/uniprot/SubcellularLocationXML.java.md
diff --git a/docs/src/main/java/com/ohnosequences/xml/model/util/Argument.java.md b/docs/src/main/java/com/ohnosequences/xml/model/util/Argument.java.md
diff --git a/docs/src/main/java/com/ohnosequences/xml/model/util/Arguments.java.md b/docs/src/main/java/com/ohnosequences/xml/model/util/Arguments.java.md
diff --git a/docs/src/main/java/com/ohnosequences/xml/model/util/Error.java.md b/docs/src/main/java/com/ohnosequences/xml/model/util/Error.java.md
diff --git a/docs/src/main/java/com/ohnosequences/xml/model/util/Execution.java.md b/docs/src/main/java/com/ohnosequences/xml/model/util/Execution.java.md
diff --git a/...c/main/java/com/ohnosequences/xml/model/util/FlexXMLWrapperClassCreator.java.md b/...c/main/java/com/ohnosequences/xml/model/util/FlexXMLWrapperClassCreator.java.md
diff --git a/docs/src/main/java/com/ohnosequences/xml/model/util/ScheduledExecutions.java.md b/docs/src/main/java/com/ohnosequences/xml/model/util/ScheduledExecutions.java.md
diff --git a/docs/src/main/java/com/ohnosequences/xml/model/util/XMLWrapperClass.java.md b/docs/src/main/java/com/ohnosequences/xml/model/util/XMLWrapperClass.java.md
diff --git a/docs/src/main/java/com/ohnosequences/xml/model/util/XMLWrapperClassCreator.java.md b/docs/src/main/java/com/ohnosequences/xml/model/util/XMLWrapperClassCreator.java.md