#730 - reformatted with black and isort

src/hgvs/edit.py

@@ -190,7 +190,7 @@ def format(self, conf=None):
         p_3_letter, p_term_asterisk, p_init_met = self._format_config_aa(conf)
 
         if self.init_met and p_init_met:
-            s = "Met1?" if p_3_letter else "M1?" 
+            s = "Met1?" if p_3_letter else "M1?"
         elif self.init_met and not p_init_met:
             s = "?"
         # subst and delins

tests/issues/test_730.py

@@ -1,31 +1,39 @@
 import os
-import pytest
 import unittest
-import hgvs.dataproviders.uta
-import hgvs.assemblymapper
+
+import pytest
 from support import CACHE
 
+import hgvs.assemblymapper
+import hgvs.dataproviders.uta
+
+
 @pytest.mark.issues
 class Test_Issues(unittest.TestCase):
-    '''
-    HGVS-730 fixes an issue where AARefAlt.format() sometimes returned the three letter amino acid  
-    when the single letter format was requested.  
-    '''
+    """
+    HGVS-730 fixes an issue where AARefAlt.format() sometimes returned the three letter amino acid
+    when the single letter format was requested.
+    """
+
     @classmethod
     def setUpClass(self):
-        self.hdp = hgvs.dataproviders.uta.connect(mode=os.environ.get("HGVS_CACHE_MODE", "run"), cache=CACHE)
-        self.am37 = hgvs.assemblymapper.AssemblyMapper(self.hdp, replace_reference=True, assembly_name="GRCh37", alt_aln_method="splign")
+        self.hdp = hgvs.dataproviders.uta.connect(
+            mode=os.environ.get("HGVS_CACHE_MODE", "run"), cache=CACHE
+        )
+        self.am37 = hgvs.assemblymapper.AssemblyMapper(
+            self.hdp, replace_reference=True, assembly_name="GRCh37", alt_aln_method="splign"
+        )
         self.hp = hgvs.parser.Parser()
 
     def test_730_format_startloss_as_configured(self):
-        '''
-        Parse a start loss and make sure the one letter and three letter protein genotypes come back as expected.   
-        '''
-        var_g = self.hp.parse_hgvs_variant('NC_000016.9:g.89985662_89985667del')
-        var_c = self.am37.g_to_c(var_g, str('NM_002386.3'))
+        """
+        Parse a start loss and make sure the one letter and three letter protein genotypes come back as expected.
+        """
+        var_g = self.hp.parse_hgvs_variant("NC_000016.9:g.89985662_89985667del")
+        var_c = self.am37.g_to_c(var_g, str("NM_002386.3"))
         var_p = self.am37.c_to_p(var_c)
         var_p_one_letter = var_p.format(conf={"p_3_letter": False})
         var_p_three_letter = var_p.format(conf={"p_3_letter": True})
-        
+
         self.assertEqual(var_p_one_letter, "NP_002377.4:p.M1?")
         self.assertEqual(var_p_three_letter, "NP_002377.4:p.Met1?")