Added new unzip tools

biobb_dna/backbone/bipopulations.py

@@ -31,6 +31,7 @@ class BIPopulations(BiobbObject):
             * **seqpos** (*list*) - (None) list of sequence positions (columns indices starting by 0) to analyze.  If not specified it will analyse the complete sequence.
             * **remove_tmp** (*bool*) - (True) [WF property] Remove temporal files.
             * **restart** (*bool*) - (False) [WF property] Do not execute if output files exist.
+            * **sandbox_path** (*str*) - ("./") [WF property] Parent path to the sandbox directory.
 
     Examples:
         This is a use example of how to use the building block from Python::

biobb_dna/backbone/canonicalag.py

@@ -31,6 +31,7 @@ class CanonicalAG(BiobbObject):
             * **seqpos** (*list*) - (None) list of sequence positions (columns indices starting by 0) to analyze.  If not specified it will analyse the complete sequence.
             * **remove_tmp** (*bool*) - (True) [WF property] Remove temporal files.
             * **restart** (*bool*) - (False) [WF property] Do not execute if output files exist.
+            * **sandbox_path** (*str*) - ("./") [WF property] Parent path to the sandbox directory.
 
     Examples:
         This is a use example of how to use the building block from Python::

biobb_dna/backbone/puckering.py

@@ -30,6 +30,7 @@ class Puckering(BiobbObject):
             * **seqpos** (*list*) - (None) list of sequence positions (columns indices starting by 0) to analyze.  If not specified it will analyse the complete sequence.
             * **remove_tmp** (*bool*) - (True) [WF property] Remove temporal files.
             * **restart** (*bool*) - (False) [WF property] Do not execute if output files exist.
+            * **sandbox_path** (*str*) - ("./") [WF property] Parent path to the sandbox directory.
 
     Examples:
         This is a use example of how to use the building block from Python::

biobb_dna/curvesplus/biobb_canal.py

@@ -38,6 +38,7 @@ class Canal(BiobbObject):
             * **binary_path** (*str*) - ('Canal') Path to Canal executable, otherwise the program wil look for Canal executable in the binaries folder.
             * **remove_tmp** (*bool*) - (True) [WF property] Remove temporal files.
             * **restart** (*bool*) - (False) [WF property] Do not execute if output files exist.
+            * **sandbox_path** (*str*) - ("./") [WF property] Parent path to the sandbox directory.
     Examples:
         This is a use example of how to use the building block from Python::
 

biobb_dna/curvesplus/biobb_canion.py

@@ -39,6 +39,7 @@ class Canion(BiobbObject):
             * **binary_path** (*str*) - (Canion) Path to Canion executable, otherwise the program wil look for Canion executable in the binaries folder.
             * **remove_tmp** (*bool*) - (True) [WF property] Remove temporal files.
             * **restart** (*bool*) - (False) [WF property] Do not execute if output files exist.
+            * **sandbox_path** (*str*) - ("./") [WF property] Parent path to the sandbox directory.
     Examples:
         This is a use example of how to use the building block from Python::
 

biobb_dna/curvesplus/biobb_curves.py

@@ -39,6 +39,7 @@ class Curves(BiobbObject):
             * **binary_path** (*str*) - (Cur+) Path to Curves+ executable, otherwise the program wil look for Cur+ executable in the binaries folder.
             * **remove_tmp** (*bool*) - (True) [WF property] Remove temporal files.
             * **restart** (*bool*) - (False) [WF property] Do not execute if output files exist.
+            * **sandbox_path** (*str*) - ("./") [WF property] Parent path to the sandbox directory.
     Examples:
         This is a use example of how to use the building block from Python::
 

biobb_dna/dna/dna_averages.py

@@ -30,6 +30,7 @@ class HelParAverages(BiobbObject):
             * **seqpos** (*list*) - (None) list of sequence positions (columns indices starting by 0) to analyze.  If not specified it will analyse the complete sequence.
             * **remove_tmp** (*bool*) - (True) [WF property] Remove temporal files.
             * **restart** (*bool*) - (False) [WF property] Do not execute if output files exist.
+            * **sandbox_path** (*str*) - ("./") [WF property] Parent path to the sandbox directory.
     Examples:
         This is a use example of how to use the building block from Python::
 

biobb_dna/dna/dna_bimodality.py

@@ -35,7 +35,8 @@ class HelParBimodality(BiobbObject):
             * **max_iter** (*int*) - (400) Number of maximum iterations for EM algorithm.
             * **tol** (*float*) - (1e-5) Tolerance value for EM algorithm.
             * **remove_tmp** (*bool*) - (True) [WF property] Remove temporal files.
-            * **restart** (*bool*) - (False) [WF property] Do not execute if output files exist.1
+            * **restart** (*bool*) - (False) [WF property] Do not execute if output files exist.
+            * **sandbox_path** (*str*) - ("./") [WF property] Parent path to the sandbox directory.1
 
     Examples:
         This is a use example of how to use the building block from Python::

biobb_dna/dna/dna_timeseries.py

@@ -32,6 +32,7 @@ class HelParTimeSeries(BiobbObject):
             * **seqpos** (*list*) - (None) list of sequence positions (columns indices starting by 0) to analyze.  If not specified it will analyse the complete sequence.
             * **remove_tmp** (*bool*) - (True) [WF property] Remove temporal files.
             * **restart** (*bool*) - (False) [WF property] Do not execute if output files exist.
+            * **sandbox_path** (*str*) - ("./") [WF property] Parent path to the sandbox directory.
 
     Examples:
         This is a use example of how to use the building block from Python::

biobb_dna/interbp_correlations/interbpcorr.py

@@ -36,6 +36,7 @@ class InterBasePairCorrelation(BiobbObject):
             * **seqpos** (*list*) - (None) list of sequence positions (columns indices starting by 0) to analyze.  If not specified it will analyse the complete sequence.
             * **remove_tmp** (*bool*) - (True) [WF property] Remove temporal files.
             * **restart** (*bool*) - (False) [WF property] Do not execute if output files exist.
+            * **sandbox_path** (*str*) - ("./") [WF property] Parent path to the sandbox directory.
 
     Examples:
         This is a use example of how to use the building block from Python::

biobb_dna/interbp_correlations/interhpcorr.py

@@ -32,6 +32,8 @@ class InterHelParCorrelation(BiobbObject):
             * **basepair** (*str*) - (None) Name of basepair analyzed.
             * **remove_tmp** (*bool*) - (True) [WF property] Remove temporal files.
             * **restart** (*bool*) - (False) [WF property] Do not execute if output files exist.
+            * **sandbox_path** (*str*) - ("./") [WF property] Parent path to the sandbox directory.
+            * **basepair** (*str*) - (None) Name of basepair analyzed.
 
     Examples:
         This is a use example of how to use the building block from Python::

biobb_dna/interbp_correlations/interseqcorr.py

@@ -30,6 +30,7 @@ class InterSequenceCorrelation(BiobbObject):
             * **seqpos** (*list*) - (None) list of sequence positions (columns indices starting by 0) to analyze.  If not specified it will analyse the complete sequence.
             * **remove_tmp** (*bool*) - (True) [WF property] Remove temporal files.
             * **restart** (*bool*) - (False) [WF property] Do not execute if output files exist.
+            * **sandbox_path** (*str*) - ("./") [WF property] Parent path to the sandbox directory.
 
     Examples:
         This is a use example of how to use the building block from Python::

biobb_dna/intrabp_correlations/intrabpcorr.py

@@ -36,6 +36,7 @@ class IntraBasePairCorrelation(BiobbObject):
             * **seqpos** (*list*) - (None) list of sequence positions (columns indices starting by 0) to analyze.  If not specified it will analyse the complete sequence.
             * **remove_tmp** (*bool*) - (True) [WF property] Remove temporal files.
             * **restart** (*bool*) - (False) [WF property] Do not execute if output files exist.
+            * **sandbox_path** (*str*) - ("./") [WF property] Parent path to the sandbox directory.
 
     Examples:
         This is a use example of how to use the building block from Python::

biobb_dna/intrabp_correlations/intrahpcorr.py

@@ -32,6 +32,8 @@ class IntraHelParCorrelation(BiobbObject):
             * **base** (*str*) - (None) Name of base analyzed.
             * **remove_tmp** (*bool*) - (True) [WF property] Remove temporal files.
             * **restart** (*bool*) - (False) [WF property] Do not execute if output files exist.
+            * **sandbox_path** (*str*) - ("./") [WF property] Parent path to the sandbox directory.
+            * **base** (*str*) - (None) Name of base analyzed.
 
     Examples:
         This is a use example of how to use the building block from Python::

biobb_dna/intrabp_correlations/intraseqcorr.py

@@ -30,6 +30,7 @@ class IntraSequenceCorrelation(BiobbObject):
             * **seqpos** (*list*) - (None) list of sequence positions (columns indices starting by 0) to analyze.  If not specified it will analyse the complete sequence.
             * **remove_tmp** (*bool*) - (True) [WF property] Remove temporal files.
             * **restart** (*bool*) - (False) [WF property] Do not execute if output files exist.
+            * **sandbox_path** (*str*) - ("./") [WF property] Parent path to the sandbox directory.
 
     Examples:
         This is a use example of how to use the building block from Python::

biobb_dna/stiffness/average_stiffness.py

@@ -31,6 +31,7 @@ class AverageStiffness(BiobbObject):
             * **seqpos** (*list*) - (None) list of sequence positions (columns indices starting by 0) to analyze.  If not specified it will analyse the complete sequence.
             * **remove_tmp** (*bool*) - (True) [WF property] Remove temporal files.
             * **restart** (*bool*) - (False) [WF property] Do not execute if output files exist.
+            * **sandbox_path** (*str*) - ("./") [WF property] Parent path to the sandbox directory.
 
     Examples:
         This is a use example of how to use the building block from Python::

biobb_dna/stiffness/basepair_stiffness.py

@@ -34,6 +34,7 @@ class BPStiffness(BiobbObject):
             * **scaling** (*list*) - ([1, 1, 1, 10.6, 10.6, 10.6]) Values by which to scale stiffness. Positions correspond to helical parameters in the order: shift, slide, rise, tilt, roll, twist.
             * **remove_tmp** (*bool*) - (True) [WF property] Remove temporal files.
             * **restart** (*bool*) - (False) [WF property] Do not execute if output files exist.
+            * **sandbox_path** (*str*) - ("./") [WF property] Parent path to the sandbox directory.
 
     Examples:
         This is a use example of how to use the building block from Python::