improve cached file name for zenodo api changes #1081
Workflow file for this run
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name: Test and Deploy bioimageio.spec | |
on: | |
push: | |
branches: [ main ] | |
pull_request: | |
branches: [ "**" ] | |
jobs: | |
black: | |
runs-on: ubuntu-latest | |
steps: | |
- uses: actions/checkout@v3 | |
- name: Check files using the black formatter | |
uses: rickstaa/action-black@v1 | |
id: action_black | |
with: | |
black_args: "." | |
- name: Annotate diff changes using reviewdog | |
if: steps.action_black.outputs.is_formatted == 'true' | |
uses: reviewdog/action-suggester@v1 | |
with: | |
tool_name: blackfmt | |
test: | |
runs-on: ubuntu-latest | |
strategy: | |
matrix: | |
python-version: [3.7, 3.8, 3.9] | |
steps: | |
- uses: actions/checkout@v3 | |
- uses: actions/setup-python@v4 | |
with: | |
python-version: ${{ matrix.python-version }} | |
cache: 'pip' | |
- name: Install dependencies | |
run: | | |
pip install --upgrade pip | |
pip install -e .[test] | |
- name: Test with pytest | |
run: pytest tests | |
- name: Check passthrough models | |
run: python scripts/generate_passthrough_modules.py check | |
# todo: add mypy checks for python 3.10 when we can add KW_ONLY to dataclasses | |
# allowing dataclass inheritance w/o the 'missing' default value | |
# - name: MyPy | |
# if: ${{ matrix.python-version == '3.10' }} | |
# run: | | |
# mkdir -p .mypy-cache | |
# mypy . --install-types --non-interactive --cache-dir .mypy-cache --explicit-package-bases --check-untyped-defs | |
conda-build: | |
runs-on: ubuntu-latest | |
needs: test | |
steps: | |
- name: checkout | |
uses: actions/checkout@v3 | |
with: | |
fetch-depth: 0 | |
- name: Install Conda environment with Micromamba | |
uses: mamba-org/provision-with-micromamba@main | |
with: | |
environment-file: false | |
environment-name: build-env | |
channels: conda-forge | |
extra-specs: | | |
boa | |
- name: linux conda build | |
shell: bash -l {0} | |
run: | | |
conda mambabuild -c conda-forge conda-recipe | |
deploy: | |
runs-on: ubuntu-latest | |
needs: test | |
steps: | |
- uses: actions/checkout@v3 | |
- name: Set up Python 3.9 | |
uses: actions/setup-python@v4 | |
with: | |
python-version: 3.9 | |
- name: Install dependencies | |
run: | | |
pip install . | |
- name: Generate Docs | |
run: python scripts/generate_rdf_docs.py | |
- name: Generate pre-/postprocessing docs | |
run: python scripts/generate_processing_docs.py | |
- name: Generate weight formats docs | |
run: python scripts/generate_weight_formats_docs.py | |
- name: Generate JSON Schema | |
run: python scripts/generate_json_specs.py | |
- name: Generate weight formats overview | |
run: python scripts/generate_weight_formats_overview.py generate | |
- name: Get branch name to deploy to | |
id: get_branch | |
shell: bash | |
run: | | |
if [[ -n '${{ github.event.pull_request.head.ref }}' ]]; then branch=gh-pages-${{ github.event.pull_request.head.ref }}; else branch=gh-pages; fi | |
echo "::set-output name=branch::$branch" | |
- name: Deploy to ${{ steps.get_branch.outputs.branch }} 🚀 | |
uses: JamesIves/github-pages-deploy-action@v4 | |
with: | |
branch: ${{ steps.get_branch.outputs.branch }} | |
folder: dist |