Update corum (#1334)

PubMed: https://pubmed.ncbi.nlm.nih.gov/39526397/ This pull request curates a new publication for the `corum` prefix. It also updates the homepage and uri_format keys since the the current homepage and resolver links are being borrowed from the `miriam` mapping which is outdated. The old homepage link leads to a 404 error and the old uri_format takes you to the current homepage. old homepage: https://mips.helmholtz-muenchen.de/genre/proj/corum new homepage: https://mips.helmholtz-muenchen.de/corum old uri_format with example identifier: https://mips.helmholtz-muenchen.de/corum/?id=100 new uri_format with example identifier: https://mips.helmholtz-muenchen.de/corum/?complex_id=100 Co-authored-by: Benjamin M. Gyori <[email protected]>
biopragmatics · Dec 18, 2024 · 4af1240 · 4af1240
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diff --git a/src/bioregistry/data/bioregistry.json b/src/bioregistry/data/bioregistry.json
@@ -21947,6 +21947,7 @@
       "prefix": "CORUM",
       "uri_format": "https://mips.helmholtz-muenchen.de/corum/?id=$1"
     },
+    "homepage": "https://mips.helmholtz-muenchen.de/corum",
     "mappings": {
       "biocontext": "CORUM",
       "fairsharing": "FAIRsharing.ohbpNw",
@@ -22002,6 +22003,12 @@
       "uri_format": "http://mips.helmholtz-muenchen.de/genre/proj/corum/complexdetails.html?id=$1"
     },
     "publications": [
+      {
+        "doi": "10.1093/nar/gkae1033",
+        "pubmed": "39526397",
+        "title": "CORUM in 2024: protein complexes as drug targets",
+        "year": 2024
+      },
       {
         "doi": "10.1093/nar/gky973",
         "pmc": "PMC6323970",
@@ -22023,7 +22030,8 @@
         }
       ],
       "uri_format": "https://mips.helmholtz-muenchen.de/corum/#?uniprotID=$1"
-    }
+    },
+    "uri_format": "https://mips.helmholtz-muenchen.de/corum/?complex_id=$1"
   },
   "cosmic": {
     "biocontext": {

diff --git a/src/bioregistry/data/curated_papers.tsv b/src/bioregistry/data/curated_papers.tsv
@@ -79,6 +79,7 @@ pubmed	relevant	orcid	date_curated	relevancy_type	pr_added	notes
 39526195	0	0009-0009-5240-7463	2024-12-05	irrelevant_other	1296	
 39526373	1	0009-0009-5240-7463	2024-12-04	new_publication	1296	This is a publication for ncbi generally, does not fit well into any existing prefix
 39526381	1	0009-0009-5240-7463	2024-12-01	new_publication	1290	Publication for refseq
+39526397	1	0009-0009-5240-7463	2024-12-16	new_publication	1334	Publication for corum
 39526405	1	0009-0009-5240-7463	2024-12-09	new_publication	1299	Publication for rfam
 39535044	1	0009-0009-5240-7463	2024-12-16	new_publication	1333	Publication for insdc
 39535874	1	0009-0009-5240-7463	2024-12-05	not_notable	1296	This database website is very low quality and fails to resolve many of its own IDs