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actions-user committed Apr 4, 2023
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78 changes: 78 additions & 0 deletions docs/_data/curation.yml
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Expand Up @@ -14,6 +14,9 @@ example:
- homepage: http://labda.inf.uc3m.es/doku.php?id=es:labda_dinto
name: The Drug-Drug Interactions Ontology
prefix: dinto
- homepage: http://www.loa.istc.cnr.it/dolce/overview.html
name: Descriptive Ontology for Linguistic and Cognitive Engineering
prefix: dolce
- homepage: https://www.aepc.org/european-paediatric-cardiac-coding
name: European Paediatric Cardiac Codes
prefix: epcc
Expand Down Expand Up @@ -47,6 +50,12 @@ example:
- homepage: http://code.google.com/p/mirna-ontology/
name: microRNA Ontology
prefix: mirnao
- homepage: https://www.avt.rwth-aachen.de/cms/AVT/Forschung/Software/~ipts/OntoCape/
name: Ontology for computer aided process engineering
prefix: nfdi4chem.ontocape
- homepage: https://zenodo.org/record/5237774#.YXq72hxCRGo
name: Ontology for simulation, modelling, and optimization
prefix: nfdi4chem.osmo
- homepage: http://neuinfo.org/
name: NIF Cell
prefix: nif.cell
Expand Down Expand Up @@ -150,6 +159,9 @@ formatter:
- homepage: https://www.ncbi.nlm.nih.gov/gv/mhc/
name: Database of human Major Histocompatibility Complex
prefix: dbmhc
- homepage: http://www.loa.istc.cnr.it/dolce/overview.html
name: Descriptive Ontology for Linguistic and Cognitive Engineering
prefix: dolce
- homepage: https://en.wikipedia.org/wiki/Diagnostic_and_Statistical_Manual_of_Mental_Disorders#DSM-IV-TR_(2000)
name: Diagnostic and Statistical Manual of Mental Disorders (4th Edition)
prefix: dsm4
Expand Down Expand Up @@ -261,6 +273,12 @@ formatter:
- homepage: https://www.nextmovesoftware.com/namerxn.html
name: NameRXN
prefix: namerxn
- homepage: https://www.avt.rwth-aachen.de/cms/AVT/Forschung/Software/~ipts/OntoCape/
name: Ontology for computer aided process engineering
prefix: nfdi4chem.ontocape
- homepage: https://zenodo.org/record/5237774#.YXq72hxCRGo
name: Ontology for simulation, modelling, and optimization
prefix: nfdi4chem.osmo
- homepage: https://webbook.nist.gov/chemistry/
name: NIST Chemistry WebBook
prefix: nist
Expand Down Expand Up @@ -342,6 +360,9 @@ formatter:
- homepage: https://www.va.gov/health
name: Veterans Health Administration (VHA) unique identifier
prefix: vuid
- homepage: https://como.ceb.cam.ac.uk/preprints/223/
name: Computational Chemistry Ontology
prefix: worldavatar.compchem
- homepage: null
name: XUO
prefix: xuo
Expand Down Expand Up @@ -566,6 +587,9 @@ pattern:
- homepage: http://www.sparontologies.net/ontologies/doco
name: Document Components Ontology
prefix: doco
- homepage: http://www.loa.istc.cnr.it/dolce/overview.html
name: Descriptive Ontology for Linguistic and Cognitive Engineering
prefix: dolce
- homepage: http://purl.obolibrary.org/obo/fbcv
name: Drosophila Phenotype Ontology
prefix: dpo
Expand Down Expand Up @@ -596,6 +620,12 @@ pattern:
- homepage: https://bioportal.bioontology.org/ontologies/EDDA
name: EDDA Study Designs Taxonomy
prefix: edda
- homepage: https://emmo-repo.github.io
name: Elementary Multiperspective Material Ontology
prefix: emmo
- homepage: https://www.iucr.org/resources/cif
name: Crystallographic Information Framework
prefix: emmo.cif
- homepage: https://www.enzolifesciences.com
name: Enzo Life Sciences
prefix: enzo
Expand Down Expand Up @@ -656,6 +686,9 @@ pattern:
- homepage: http://www.sparontologies.net/ontologies/frbr
name: Functional Requirements for Bibliographic Records
prefix: frbr
- homepage: http://ontologies.makolab.com/gc06/gc.html
name: Gainesville Core Ontology
prefix: gainesville.core
- homepage: https://www.opengalen.org
name: GALEN
prefix: galen
Expand Down Expand Up @@ -810,6 +843,9 @@ pattern:
- homepage: http://influenza.korea.ac.kr
name: Influenza Sequence and Epitope Database
prefix: ised
- homepage: https://15926.org/home/
name: ISO 15926-14
prefix: iso15926
- homepage: http://influenza.psych.ac.cn/
name: Influenza Virus Database
prefix: ivdb
Expand Down Expand Up @@ -930,6 +966,12 @@ pattern:
- homepage: http://aimlab.cs.uoregon.edu/NEMO/web/index.html
name: Neural ElectroMagnetic Ontology
prefix: nemo2
- homepage: https://www.avt.rwth-aachen.de/cms/AVT/Forschung/Software/~ipts/OntoCape/
name: Ontology for computer aided process engineering
prefix: nfdi4chem.ontocape
- homepage: https://zenodo.org/record/5237774#.YXq72hxCRGo
name: Ontology for simulation, modelling, and optimization
prefix: nfdi4chem.osmo
- homepage: https://stemcells.nindsgenetics.org
name: NINDS Human Cell and Data Repository
prefix: nhcdr
Expand Down Expand Up @@ -1281,6 +1323,12 @@ pattern:
- homepage: http://world-2dpage.expasy.org/repository/
name: The World-2DPAGE database
prefix: world2dpage
- homepage: https://como.ceb.cam.ac.uk/preprints/223/
name: Computational Chemistry Ontology
prefix: worldavatar.compchem
- homepage: http://www.theworldavatar.com/ontokin/
name: Ontology for Chemical Kinetic Reaction Mechanisms
prefix: worldavatar.kin
- homepage: http://www.psidev.info/groups/controlled-vocabularies
name: Cross-linker reagents ontology
prefix: xl
Expand Down Expand Up @@ -2450,6 +2498,9 @@ wikidata:
- homepage: http://www.sparontologies.net/ontologies/doco
name: Document Components Ontology
prefix: doco
- homepage: http://www.loa.istc.cnr.it/dolce/overview.html
name: Descriptive Ontology for Linguistic and Cognitive Engineering
prefix: dolce
- homepage: http://korkinlab.org/dommino
name: Database of Macromolecular Interactions
prefix: dommino
Expand Down Expand Up @@ -2615,6 +2666,12 @@ wikidata:
- homepage: https://www.ebi.ac.uk/pdbe/emdb/
name: Electron Microscopy Data Bank
prefix: emdb
- homepage: https://emmo-repo.github.io
name: Elementary Multiperspective Material Ontology
prefix: emmo
- homepage: https://www.iucr.org/resources/cif
name: Crystallographic Information Framework
prefix: emmo.cif
- homepage: https://reaxys.emolecules.com
name: Reaxys eMolecules
prefix: emolecules
Expand Down Expand Up @@ -2880,6 +2937,9 @@ wikidata:
- homepage: http://www.gabipd.org/
name: Network of Different Plant Genomic Research Projects
prefix: gabi
- homepage: http://ontologies.makolab.com/gc06/gc.html
name: Gainesville Core Ontology
prefix: gainesville.core
- homepage: https://www.opengalen.org
name: GALEN
prefix: galen
Expand Down Expand Up @@ -3504,6 +3564,9 @@ wikidata:
- homepage: https://www.iso.org/iso-3166-country-codes.html
name: ISO 3166-1 Country Code
prefix: iso.3166
- homepage: https://15926.org/home/
name: ISO 15926-14
prefix: iso15926
- homepage: https://portal.issn.org
name: International Standard Serial Number
prefix: issn
Expand Down Expand Up @@ -4116,6 +4179,15 @@ wikidata:
- homepage: https://www.nextprot.org/
name: neXtProt family
prefix: nextprot.family
- homepage: https://champ.stuchalk.domains.unf.edu
name: Chemical Analysis Ontology
prefix: nfdi4chem.cao
- homepage: https://www.avt.rwth-aachen.de/cms/AVT/Forschung/Software/~ipts/OntoCape/
name: Ontology for computer aided process engineering
prefix: nfdi4chem.ontocape
- homepage: https://zenodo.org/record/5237774#.YXq72hxCRGo
name: Ontology for simulation, modelling, and optimization
prefix: nfdi4chem.osmo
- homepage: https://genelab-data.ndc.nasa.gov/genelab/
name: NASA GeneLab
prefix: ngl
Expand Down Expand Up @@ -5647,6 +5719,12 @@ wikidata:
- homepage: http://world-2dpage.expasy.org/repository/
name: The World-2DPAGE database
prefix: world2dpage
- homepage: https://como.ceb.cam.ac.uk/preprints/223/
name: Computational Chemistry Ontology
prefix: worldavatar.compchem
- homepage: http://www.theworldavatar.com/ontokin/
name: Ontology for Chemical Kinetic Reaction Mechanisms
prefix: worldavatar.kin
- homepage: https://www.wormbase.org/db/seq/protein
name: Wormpep
prefix: wormpep
Expand Down
5 changes: 5 additions & 0 deletions docs/_data/warnings.yml
Original file line number Diff line number Diff line change
Expand Up @@ -457,3 +457,8 @@ wrong_patterns:
miriam: ^((VGNC|vgnc):)?\d{1,9}$
name: Vertebrate Gene Nomenclature Committee
prefix: vgnc
- correct: ^\S+$
homepage: http://en.wikipedia.org/wiki/Main_Page
miriam: ^[A-Za-z-0-9_]+$
name: Wikipedia
prefix: wikipedia.en
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