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Update OBO in OWL #973

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merged 3 commits into from
Nov 16, 2023
Merged

Update OBO in OWL #973

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3a17b65
Update OIO
cthoyt Nov 2, 2023
ff6cad0
Update bioregistry.json
cthoyt Nov 16, 2023
1a88bb0
Merge branch 'main' into update-oio
cthoyt Nov 16, 2023
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20 changes: 18 additions & 2 deletions src/bioregistry/data/bioregistry.json
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Original file line number Diff line number Diff line change
Expand Up @@ -69551,16 +69551,27 @@
"prefix": "oboformat",
"uri_format": "http://www.geneontology.org/formats/oboInOwl#$1"
},
"contact": {
"email": "[email protected]",
"github": "cmungall",
"name": "Chris Mungall",
"orcid": "0000-0002-6601-2165"
},
"contributor": {
"email": "[email protected]",
"github": "cthoyt",
"name": "Charles Tapley Hoyt",
"orcid": "0000-0003-4423-4370"
},
"description": "This meta-ontology is self-describing. OBO metamodel properties are described using OBO metamodel properties",
"download_obo": "https://github.com/geneontology/go-ontology/raw/master/contrib/oboInOwl.obo",
"download_owl": "https://github.com/geneontology/go-ontology/raw/master/contrib/oboInOwl.owl",
"download_obo": "http://www.geneontology.org/formats/oboInOwl.obo",
"download_owl": "http://www.geneontology.org/formats/oboInOwl.owl",
"example": "hasDbXref",
"example_extras": [
"hasExactSynonym",
"hasBroadSynonym",
"hasNarrowSynonym"
],
"fairsharing": {
"abbreviation": "OBO Format",
"description": "The first part of this specification describes the syntax and structure of OBO Format using BNF. This states how strings of characters in OBOF Files are parsed into abstract OBO documents, and describes constraints on the structure of these documents. The second part of this specification describes the semantics of an OBO document via a mapping to OWL2-DL and community metadata vocabularies.",
Expand All @@ -69584,7 +69595,12 @@
"download": "https://raw.githubusercontent.com/geneontology/go-ontology/master/contrib/oboInOwl",
"prefix": "oboinowl"
},
"pattern": "^\\w+$",
"preferred_prefix": "oboInOwl",
"references": [
"https://github.com/biopragmatics/bioregistry/pull/973",
"https://github.com/geneontology/go-site/issues/2157"
],
"repository": "https://github.com/geneontology/go-ontology",
"synonyms": [
"oboformat",
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