Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Demonstrating adding slim version of EC #12

Open
wants to merge 2 commits into
base: main
Choose a base branch
from
Open

Demonstrating adding slim version of EC #12

wants to merge 2 commits into from

Conversation

cthoyt
Copy link
Member

@cthoyt cthoyt commented Nov 4, 2024

References #13 and biopragmatics/pyobo#202

This PR demonstrates adding EC slim products, which simply don't have any relationship: rows in the OBO file and the OWL file is what you get from robot convert

  1. https://github.com/biopragmatics/obo-db-ingest/raw/refs/heads/add-slims/export/eccode/eccode-slim.obo (1.5MB vs 18.2MB for full)
  2. https://github.com/biopragmatics/obo-db-ingest/raw/refs/heads/add-slims/export/eccode/eccode-slim.owl (3.9MB uncompressed vs 3.5MB compressed for full)

@cthoyt
Copy link
Member Author

cthoyt commented Nov 4, 2024

cc @cmungall

cthoyt added a commit to biopragmatics/pyobo that referenced this pull request Nov 5, 2024
References biopragmatics/obo-db-ingest#13

Demonstration of results are in
biopragmatics/obo-db-ingest#12

This PR enables serializing to OBO but skipping object properties, as
requested by @cmungall
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

1 participant