fix: ci for config copy #5

	name: Continuous Integration

	on:
	push:

	jobs:
	configure-environment:
	runs-on: ubuntu-latest
	steps:
	# Step 1: Checkout repository
	- name: Checkout code
	uses: actions/checkout@v2

	# Step 2: Log in to GHCR
	- name: Log in to GHCR
	run: echo "${{ secrets.REPO_ADMIN_GHCR_TOKEN }}" \| docker login ghcr.io -u "${{ secrets.REPO_ADMIN_GH_USERNAME }}" --password-stdin

	# Step 3: Install Docker Compose
	- name: Install Docker Compose
	run: \|
	sudo curl -L "https://github.com/docker/compose/releases/download/$(curl -s https://api.github.com/repos/docker/compose/releases/latest \| grep 'tag_name' \| cut -d\" -f4)/docker-compose-$(uname -s)-$(uname -m)" -o /usr/local/bin/docker-compose
	sudo chmod +x /usr/local/bin/docker-compose
	docker-compose --version # Check if Docker Compose is installed correctly

	- name: Install Python and PyYAML
	run: \|
	sudo apt-get update
	sudo apt-get install -y python3 python3-pip
	pip install pyyaml

	build-base-image:
	needs: configure-environment
	runs-on: ubuntu-latest
	steps:
	- name: Checkout code
	uses: actions/checkout@v2

	- name: Get base image version
	run: \|
	BASE_VERSION=$(cat ./assets/.BASE_VERSION)
	echo "BASE_VERSION=$BASE_VERSION" >> $GITHUB_ENV
	echo "Base Version: $BASE_VERSION"

	- name: Create gcloud config
	run: \|
	echo "$BIOSIMULATIONS_GCLOUD_CONFIG" > ./assets/configs/.biosimulations.json
	env:
	BIOSIMULATIONS_GCLOUD_CONFIG: ${{ secrets.BIO_JSON_CONTENT }}

	- name: Build base image
	run: \|
	docker build --no-cache -f ./Dockerfile-base -t ghcr.io/biosimulators/bio-check-base:${{ env.BASE_VERSION }} .
	docker images

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