update for latest api

biosimulators · Oct 17, 2024 · 35f2d3c · 35f2d3c
1 parent 3790926
commit 35f2d3c
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Showing 4 changed files with 9 additions and 10 deletions.
diff --git a/compose_api/.CONTAINER_VERSION b/compose_api/.CONTAINER_VERSION
@@ -1 +1 @@
-1.11.6
+1.11.7
diff --git a/compose_api/main.py b/compose_api/main.py
@@ -600,14 +600,13 @@ async def fetch_results(job_id: str):
 
         # output-case: output content in dict is a downloadable file
         if isinstance(job_data, dict):
-            if "results_file" in job_data.keys():
-                remote_fp = job_data['results_file']
-                if remote_fp is not None:
-                    temp_dest = mkdtemp()
-                    local_fp = download_file_from_bucket(source_blob_path=remote_fp, out_dir=temp_dest, bucket_name=BUCKET_NAME)
+            remote_fp = job_data.get("results").get("results_file")
+            if remote_fp is not None:
+                temp_dest = mkdtemp()
+                local_fp = download_file_from_bucket(source_blob_path=remote_fp, out_dir=temp_dest, bucket_name=BUCKET_NAME)
 
-                    return FileResponse(path=local_fp, media_type="application/octet-stream", filename=local_fp.split("/")[-1])
-                    # return {'path': local_fp, 'media_type': 'application/octet-stream', 'filename': local_fp.split('/')[-1]}
+                return FileResponse(path=local_fp, media_type="application/octet-stream", filename=local_fp.split("/")[-1])
+                # return {'path': local_fp, 'media_type': 'application/octet-stream', 'filename': local_fp.split('/')[-1]}
 
         # otherwise, return job content
         return {'content': job}

diff --git a/docker-compose.yaml b/docker-compose.yaml
@@ -15,7 +15,7 @@ services:
     build:
       context: ./compose_api
       dockerfile: ./Dockerfile-compose_api
-    image: ghcr.io/biosimulators/bio-check-compose_api:1.11.7  # .3
+    image: ghcr.io/biosimulators/bio-check-compose_api:1.11.8  # .3
     container_name: api
     environment:
       - MONGO_URI=mongodb://mongodb:27017/?retryWrites=true&w=majority&appName=bio-compose

diff --git a/kustomize/overlays/biochecknet/kustomization.yaml b/kustomize/overlays/biochecknet/kustomization.yaml
@@ -8,7 +8,7 @@ namespace: biochecknet
 # PREVIOUS (MOST CURRENTLY RELEASED) VERSIONS AS OF 10/17(SMOLDYN BUG): api: 1.11.4, worker: 1.11.6
 images:
 - name: ghcr.io/biosimulators/bio-check-compose_api
-  newTag: 1.11.7
+  newTag: 1.11.8
 - name: ghcr.io/biosimulators/bio-check-compose_worker
   newTag: 1.11.6
 - name: mongo