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chore: rm pysces from sim list
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AlexPatrie committed Oct 29, 2024
1 parent 6add0f3 commit 81c6971
Showing 1 changed file with 2 additions and 2 deletions.
4 changes: 2 additions & 2 deletions compose_worker/output_data.py
Original file line number Diff line number Diff line change
Expand Up @@ -338,7 +338,7 @@ def generate_biosimulator_utc_outputs(omex_fp: str, output_root_dir: str, simula
make_dir(output_root_dir)

output_data = {}
sims = simulators or ['amici', 'copasi', 'tellurium', 'pysces']
sims = simulators or ['amici', 'copasi', 'tellurium'] # , 'pysces']
sim_config = Config(
LOG=False,
ALGORITHM_SUBSTITUTION_POLICY=AlgorithmSubstitutionPolicy[alg_policy.upper()],
Expand Down Expand Up @@ -411,7 +411,7 @@ def generate_sbml_utc_outputs(sbml_fp: str, start: int, dur: int, steps: int, si
# output[simulator_name] = sim_data
output = {}
sbml_species_ids = list(get_sbml_species_mapping(sbml_fp).keys())
simulators = simulators or ['amici', 'copasi', 'tellurium', 'pysces']
simulators = simulators or ['amici', 'copasi', 'tellurium'] # , 'pysces']
all_output_ids = []
for simulator in simulators:
results = {}
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