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blaxterlab

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  1. blobology blobology Public

    Tools for making blobplots or Taxon-Annotated-GC-Coverage plots (TAGC plots) to visualise the contents of genome assembly data sets as a QC step (NO LONGER MANTAINED)

    Perl 46 17

  2. scripts scripts Public

    Blaxter lab scripts

    Perl 7 1

  3. braker-docker braker-docker Public

    Docker container for running braker gene finder

    6 1

  4. ncbi-blast-docker ncbi-blast-docker Public

    Docker container to run NCBI blast using GNU parallel

    Perl 2 1

  5. interproscan-docker interproscan-docker Public

    Docker container to run EBI Interproscan

    2 5

  6. nembase4 nembase4 Public

    NEMBASE is a resource for nematode transcriptome analysis, and a research tool for nematode biology, drug discovery and vaccine design.

    PHP 1

Repositories

Showing 10 of 19 repositories
  • blobology Public

    Tools for making blobplots or Taxon-Annotated-GC-Coverage plots (TAGC plots) to visualise the contents of genome assembly data sets as a QC step (NO LONGER MANTAINED)

    Perl 46 MIT 17 5 2 Updated May 27, 2022
  • 0 1 0 0 Updated Oct 9, 2017
  • shortstack-docker Public

    Docker container for running ShortStack for small RNAs

    0 GPL-3.0 0 0 0 Updated Jul 5, 2017
  • HTML 0 Apache-2.0 1 0 0 Updated Jun 19, 2017
  • Perl 0 MIT 0 0 0 Updated Jun 2, 2017
  • braker-docker Public

    Docker container for running braker gene finder

    6 MIT 1 0 0 Updated May 24, 2017
  • bridger-docker Public

    Docker container for running Bridger assembler for transcriptomes

    0 MIT 0 0 0 Updated May 24, 2017
  • prokka-docker Public
    0 Apache-2.0 0 0 0 Updated Apr 12, 2017
  • interproscan-docker Public

    Docker container to run EBI Interproscan

    2 MIT 5 0 0 Updated Mar 28, 2017
  • ncbi-blast-docker Public

    Docker container to run NCBI blast using GNU parallel

    Perl 2 MIT 1 0 0 Updated Mar 7, 2017