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Optimizing and predicting performance of DNA methylation biomarkers using sequence methylation density information.

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EpiClass

Quick Installation:

note: built with python==3.7 recommend installing in conda environment first.

conda create -n name python==3.7 pip

pip install EpiClass

readthedocs.com documentation:

https://epiclass.readthedocs.io/en/latest/index.html

check out the preprint for more information:

https://doi.org/10.1101/579839

For a deeper look into the code and generating the figures in the manuscript, check out the vignette on GitHub:

https://github.com/bmill3r/EpiClass/blob/master/manuscript_figures/vignette/README_Vignette.ipynb

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