Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

An error when trying to predict perturbations in reploge dataset #245

Open
HelloWorldLTY opened this issue Aug 30, 2024 · 0 comments
Open

Comments

@HelloWorldLTY
Copy link

Hi, I tried to use scGPT to predict gene expression based on the large-scale reploge dataset. However, I met an error in the evaluation step, for computing the deg part:

image

I thought this might be caused by the method used to select deg. Did you also meet this error in running the experiments of original manuscript? Thanks a lot!

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

1 participant