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114 Open 125 Closed
114 Open 125 Closed
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Issues list

Request for Checkpoints for Each Downstream Task (e.g., Perturbation)
#275 opened Dec 7, 2024 by JunyanReplicant
pre-training using cell prompt
#274 opened Nov 27, 2024 by matsunokentaro
CellXGene census 2024-07-01 NA values?
#273 opened Nov 24, 2024 by rpeys
Inconsistent Data Preprocessing in Tutorial_ZeroShot_Integration.ipynb
#270 opened Nov 14, 2024 by nc1m
2
Code for testing the model on the Adamson and Replogle datasets
#265 opened Oct 23, 2024 by gefeiwang
1
what's the "loss_gen" during pre-training stage
#264 opened Oct 21, 2024 by lishensuo
Census VERSION is not valid in cellxgene/data_config.py
#263 opened Oct 16, 2024 by Fredrick-Kakembo
1
Cell Type Classification Datasets
#262 opened Oct 3, 2024 by nc1m
1
Issue on Tutorial Annotation - UMAP is not from Learned Cell Embeddings
#259 opened Sep 24, 2024 by ManuelSokolov
2
Code to pretrain model from scratch on my own dataset
#257 opened Sep 23, 2024 by igor-sadalski
1
Assistance Needed with Adding Cell-Type Column to h5ad File for scGPT Hub Submission
#256 opened Sep 19, 2024 by msyed786
1
Unable to resolve dependencies when fixing the lock file in developer mode
#255 opened Sep 17, 2024 by igor-sadalski
2
TypeError: bwd(): incompatible function arguments.
#253 opened Sep 17, 2024 by IchigoJiken
link to raw data origin of Immune Human dataset
#252 opened Sep 16, 2024 by talbCgen
Why is X not standarized using the preprocess() funnction in Tutorial_Reference_Mapping.ipynb?
#251 opened Sep 15, 2024 by Ale9806
Request for FlashAttention v2 Support
#249 opened Sep 13, 2024 by qianachen
about the masking procedure
#248 opened Sep 7, 2024 by FUminlee
2
AttributeError: 'MultiheadAttention' object has no attribute 'Wqkv'
#247 opened Sep 4, 2024 by yuhan1li
1
Try to reconstruct the exp
#246 opened Sep 2, 2024 by YOU-k
1
An error when trying to predict perturbations in reploge dataset
#245 opened Aug 30, 2024 by HelloWorldLTY
Poor quality of batch integration
#244 opened Aug 26, 2024 by chrarnold
Bridging the gap: Creating a (corrected and/or imputed) gene expression matrix after the embedding
#243 opened Aug 26, 2024 by chrarnold
About the pertaining part
#242 opened Aug 25, 2024 by FUminlee
1
Help with the installation on colab
#241 opened Aug 16, 2024 by bitcometz
2
question about gene2idx order
#240 opened Aug 15, 2024 by hongruhu
ProTip! What’s not been updated in a month: updated:<2024-11-23.