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braingeneers/data/test_data/maxwell-metadata.expected.json
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{ | ||
"uuid": "2023-08-12-e-GABA_v0", | ||
"timestamp": "2023-10-05T18:10:02", | ||
"hardware": "Maxwell", | ||
"maxwell_chip_id": "20325, 20247, 20402", | ||
"notes": { | ||
"purpose": "GABA dose response sweep. Gaba added X:55-X+1:~15 for x=2,4,... Started at .5uM, doubled each time (last was 14 not 16)", | ||
"biology": { | ||
"sample_type": "organoid", | ||
"aggregation_date": "23-06-22", | ||
"plating_date": "23-07-17", | ||
"species": "mouse", | ||
"cell_line": "e14", | ||
"genotype": "", | ||
"culture_media": "gfcdm", | ||
"organoid_tracker_sr_no": "", | ||
"organoid modification": "", | ||
"organoid modification date": "" | ||
}, | ||
"stimulation": { | ||
"optogenetic": false, | ||
"electrical": false, | ||
"pharmacological": "GABA" | ||
}, | ||
"automated_feeding": false, | ||
"automated_imaging": false, | ||
"comments": "" | ||
}, | ||
"ephys_experiments": { | ||
"data_GABA_BL_20325": { | ||
"name": "data_GABA_BL_20325", | ||
"maxwell_chip_number": "N/A", | ||
"maxwell_tracker_sr_no": "xxxxxx", | ||
"channels": [], | ||
"notes": "", | ||
"num_channels": 819, | ||
"num_current_input_channels": 0, | ||
"num_voltage_channels": 32, | ||
"offset": 0, | ||
"sample_rate": 20000, | ||
"voltage_scaling_factor": 1, | ||
"timestamp": "2023-08-12 T15:01:19;", | ||
"units": "\u00b5V", | ||
"version": 20190530, | ||
"blocks": [ | ||
{ | ||
"num_frames": 6001200, | ||
"path": "shared/data_GABA_BL_20325.nwb", | ||
"timestamp": "2023-08-12 T15:01:19;" | ||
} | ||
], | ||
"data_format": "NeurodataWithoutBorders" | ||
}, | ||
"Trace_20230812_17_00_14_GABA_BL_20247": { | ||
"name": "Trace_20230812_17_00_14_GABA_BL_20247", | ||
"maxwell_chip_number": "N/A", | ||
"maxwell_tracker_sr_no": "xxxxxx", | ||
"channels": [], | ||
"notes": "", | ||
"num_channels": 944, | ||
"num_current_input_channels": 0, | ||
"num_voltage_channels": 32, | ||
"offset": 0, | ||
"sample_rate": 20000, | ||
"voltage_scaling_factor": 1, | ||
"timestamp": "2023-08-12 T17:00:41;", | ||
"units": "\u00b5V", | ||
"version": 20190530, | ||
"blocks": [ | ||
{ | ||
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"path": "shared/Trace_20230812_17_00_14_GABA_BL_20247.nwb", | ||
"timestamp": "2023-08-12 T17:00:41;" | ||
} | ||
], | ||
"data_format": "NeurodataWithoutBorders" | ||
}, | ||
"Trace_20230812_15_55_43_GABA_BL_20402": { | ||
"name": "Trace_20230812_15_55_43_GABA_BL_20402", | ||
"maxwell_chip_number": "N/A", | ||
"maxwell_tracker_sr_no": "xxxxxx", | ||
"channels": [], | ||
"notes": "", | ||
"num_channels": 971, | ||
"num_current_input_channels": 0, | ||
"num_voltage_channels": 32, | ||
"offset": 0, | ||
"sample_rate": 20000, | ||
"voltage_scaling_factor": 1, | ||
"timestamp": "2023-08-12 T15:58:02;", | ||
"units": "\u00b5V", | ||
"version": 20190530, | ||
"blocks": [ | ||
{ | ||
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"path": "shared/Trace_20230812_15_55_43_GABA_BL_20402.nwb", | ||
"timestamp": "2023-08-12 T15:58:02;" | ||
} | ||
], | ||
"data_format": "NeurodataWithoutBorders" | ||
}, | ||
"Trace_20230812_16_03_20_GABA_DR2_20402": { | ||
"name": "Trace_20230812_16_03_20_GABA_DR2_20402", | ||
"maxwell_chip_number": "N/A", | ||
"maxwell_tracker_sr_no": "xxxxxx", | ||
"channels": [], | ||
"notes": "", | ||
"num_channels": 971, | ||
"num_current_input_channels": 0, | ||
"num_voltage_channels": 32, | ||
"offset": 0, | ||
"sample_rate": 20000, | ||
"voltage_scaling_factor": 1, | ||
"timestamp": "2023-08-12 T16:04:39;", | ||
"units": "\u00b5V", | ||
"version": 20190530, | ||
"blocks": [ | ||
{ | ||
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"path": "shared/Trace_20230812_16_03_20_GABA_DR2_20402.nwb", | ||
"timestamp": "2023-08-12 T16:04:39;" | ||
} | ||
], | ||
"data_format": "NeurodataWithoutBorders" | ||
}, | ||
"Trace_20230812_15_18_49_GABA_DR_20325": { | ||
"name": "Trace_20230812_15_18_49_GABA_DR_20325", | ||
"maxwell_chip_number": "N/A", | ||
"maxwell_tracker_sr_no": "xxxxxx", | ||
"channels": [], | ||
"notes": "", | ||
"num_channels": 819, | ||
"num_current_input_channels": 0, | ||
"num_voltage_channels": 32, | ||
"offset": 0, | ||
"sample_rate": 20000, | ||
"voltage_scaling_factor": 1, | ||
"timestamp": "2023-08-12 T15:19:25;", | ||
"units": "\u00b5V", | ||
"version": 20190530, | ||
"blocks": [ | ||
{ | ||
"num_frames": 16888000, | ||
"path": "shared/Trace_20230812_15_18_49_GABA_DR_20325.nwb", | ||
"timestamp": "2023-08-12 T15:19:25;" | ||
} | ||
], | ||
"data_format": "NeurodataWithoutBorders" | ||
}, | ||
"Trace_20230812_17_27_36_GABA_DR_20247": { | ||
"name": "Trace_20230812_17_27_36_GABA_DR_20247", | ||
"maxwell_chip_number": "N/A", | ||
"maxwell_tracker_sr_no": "xxxxxx", | ||
"channels": [], | ||
"notes": "", | ||
"num_channels": 944, | ||
"num_current_input_channels": 0, | ||
"num_voltage_channels": 32, | ||
"offset": 0, | ||
"sample_rate": 20000, | ||
"voltage_scaling_factor": 1, | ||
"timestamp": "2023-08-12 T17:27:59;", | ||
"units": "\u00b5V", | ||
"version": 20190530, | ||
"blocks": [ | ||
{ | ||
"num_frames": 16890400, | ||
"path": "shared/Trace_20230812_17_27_36_GABA_DR_20247.nwb", | ||
"timestamp": "2023-08-12 T17:27:59;" | ||
} | ||
], | ||
"data_format": "NeurodataWithoutBorders" | ||
} | ||
} | ||
} |
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@@ -0,0 +1,174 @@ | ||
{ | ||
"uuid": "2023-08-12-e-GABA_v0", | ||
"timestamp": "", | ||
"maxwell_chip_id": "20325, 20247, 20402", | ||
"notes": { | ||
"purpose": "GABA dose response sweep. Gaba added X:55-X+1:~15 for x=2,4,... Started at .5uM, doubled each time (last was 14 not 16)", | ||
"biology": { | ||
"sample_type": "organoid", | ||
"aggregation_date": "23-06-22", | ||
"plating_date": "23-07-17", | ||
"species": "mouse", | ||
"cell_line": "e14", | ||
"genotype": "", | ||
"culture_media": "gfcdm", | ||
"organoid_tracker_sr_no": "", | ||
"organoid modification": "", | ||
"organoid modification date": "" | ||
}, | ||
"stimulation": { | ||
"optogenetic": false, | ||
"electrical": false, | ||
"pharmacological": "GABA" | ||
}, | ||
"automated_feeding": false, | ||
"automated_imaging": false, | ||
"comments": "" | ||
}, | ||
"ephys_experiments": { | ||
"data_GABA_BL_20325": { | ||
"name": "data_GABA_BL_20325", | ||
"hardware": "Maxwell", | ||
"maxwell_chip_number": "N/A", | ||
"maxwell_tracker_sr_no": "xxxxxx", | ||
"channels": [], | ||
"notes": "", | ||
"num_channels": 819, | ||
"num_current_input_channels": 0, | ||
"num_voltage_channels": 32, | ||
"offset": 0, | ||
"sample_rate": 20000, | ||
"voltage_scaling_factor": 1, | ||
"timestamp": "2023-08-12 T15:01:19;", | ||
"units": "\u00b5V", | ||
"version": 20190530, | ||
"blocks": [ | ||
{ | ||
"num_frames": 6001200, | ||
"path": "original/data/data_GABA_BL_20325.raw.h5", | ||
"timestamp": "2023-08-12 T15:01:19;" | ||
} | ||
] | ||
}, | ||
"Trace_20230812_17_00_14_GABA_BL_20247": { | ||
"name": "Trace_20230812_17_00_14_GABA_BL_20247", | ||
"hardware": "Maxwell", | ||
"maxwell_chip_number": "N/A", | ||
"maxwell_tracker_sr_no": "xxxxxx", | ||
"channels": [], | ||
"notes": "", | ||
"num_channels": 944, | ||
"num_current_input_channels": 0, | ||
"num_voltage_channels": 32, | ||
"offset": 0, | ||
"sample_rate": 20000, | ||
"voltage_scaling_factor": 1, | ||
"timestamp": "2023-08-12 T17:00:41;", | ||
"units": "\u00b5V", | ||
"version": 20190530, | ||
"blocks": [ | ||
{ | ||
"num_frames": 6242800, | ||
"path": "original/data/Trace_20230812_17_00_14_GABA_BL_20247.raw.h5", | ||
"timestamp": "2023-08-12 T17:00:41;" | ||
} | ||
] | ||
}, | ||
"Trace_20230812_15_55_43_GABA_BL_20402": { | ||
"name": "Trace_20230812_15_55_43_GABA_BL_20402", | ||
"hardware": "Maxwell", | ||
"maxwell_chip_number": "N/A", | ||
"maxwell_tracker_sr_no": "xxxxxx", | ||
"channels": [], | ||
"notes": "", | ||
"num_channels": 971, | ||
"num_current_input_channels": 0, | ||
"num_voltage_channels": 32, | ||
"offset": 0, | ||
"sample_rate": 20000, | ||
"voltage_scaling_factor": 1, | ||
"timestamp": "2023-08-12 T15:58:02;", | ||
"units": "\u00b5V", | ||
"version": 20190530, | ||
"blocks": [ | ||
{ | ||
"num_frames": 6108800, | ||
"path": "original/data/Trace_20230812_15_55_43_GABA_BL_20402.raw.h5", | ||
"timestamp": "2023-08-12 T15:58:02;" | ||
} | ||
] | ||
}, | ||
"Trace_20230812_16_03_20_GABA_DR2_20402": { | ||
"name": "Trace_20230812_16_03_20_GABA_DR2_20402", | ||
"hardware": "Maxwell", | ||
"maxwell_chip_number": "N/A", | ||
"maxwell_tracker_sr_no": "xxxxxx", | ||
"channels": [], | ||
"notes": "", | ||
"num_channels": 971, | ||
"num_current_input_channels": 0, | ||
"num_voltage_channels": 32, | ||
"offset": 0, | ||
"sample_rate": 20000, | ||
"voltage_scaling_factor": 1, | ||
"timestamp": "2023-08-12 T16:04:39;", | ||
"units": "\u00b5V", | ||
"version": 20190530, | ||
"blocks": [ | ||
{ | ||
"num_frames": 16962400, | ||
"path": "original/data/Trace_20230812_16_03_20_GABA_DR2_20402.raw.h5", | ||
"timestamp": "2023-08-12 T16:04:39;" | ||
} | ||
] | ||
}, | ||
"Trace_20230812_15_18_49_GABA_DR_20325": { | ||
"name": "Trace_20230812_15_18_49_GABA_DR_20325", | ||
"hardware": "Maxwell", | ||
"maxwell_chip_number": "N/A", | ||
"maxwell_tracker_sr_no": "xxxxxx", | ||
"channels": [], | ||
"notes": "", | ||
"num_channels": 819, | ||
"num_current_input_channels": 0, | ||
"num_voltage_channels": 32, | ||
"offset": 0, | ||
"sample_rate": 20000, | ||
"voltage_scaling_factor": 1, | ||
"timestamp": "2023-08-12 T15:19:25;", | ||
"units": "\u00b5V", | ||
"version": 20190530, | ||
"blocks": [ | ||
{ | ||
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"path": "original/data/Trace_20230812_15_18_49_GABA_DR_20325.raw.h5", | ||
"timestamp": "2023-08-12 T15:19:25;" | ||
} | ||
] | ||
}, | ||
"Trace_20230812_17_27_36_GABA_DR_20247": { | ||
"name": "Trace_20230812_17_27_36_GABA_DR_20247", | ||
"hardware": "Maxwell", | ||
"maxwell_chip_number": "N/A", | ||
"maxwell_tracker_sr_no": "xxxxxx", | ||
"channels": [], | ||
"notes": "", | ||
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"voltage_scaling_factor": 1, | ||
"timestamp": "2023-08-12 T17:27:59;", | ||
"units": "\u00b5V", | ||
"version": 20190530, | ||
"blocks": [ | ||
{ | ||
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"path": "original/data/Trace_20230812_17_27_36_GABA_DR_20247.raw.h5", | ||
"timestamp": "2023-08-12 T17:27:59;" | ||
} | ||
] | ||
} | ||
} | ||
} |
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