Switch to github pages to deploy, add default model and sample h5ad t…

…o repo so that users can just click predict to get started

.gitignore

@@ -1,6 +1,6 @@
 /venv   
 /data
-/models
+/checkpoints
 
 .DS_Store
 

index.html

@@ -6,7 +6,7 @@
     <meta name="viewport" content="width=device-width, initial-scale=1.0">
     <link rel="stylesheet" href="https://cdn.jsdelivr.net/npm/[email protected]/dist/css/bootstrap.min.css"
         integrity="sha384-GJzZqFGwb1QTTN6wy59ffF1BuGJpLSa9DkKMp0DgiMDm4iYMj70gZWKYbI706tWS" crossorigin="anonymous">
-    <!-- ONNX Web WASM Runtime-->
+    <link rel="stylesheet" href="https://cdn.jsdelivr.net/npm/[email protected]/font/bootstrap-icons.css">
     <title>SIMS Web</title>
 </head>
 
@@ -15,7 +15,13 @@
         <div class="row">
             <div class="col">
                 <div class="mb-3 mt-3">
-                    <h2 class="mb-3" style="font-weight: 300">SIMS Web </h2>
+                    <div class="d-flex justify-content-between align-items-center mb-3 mt-3">
+                        <h2 class="mb-0" style="font-weight: 300">SIMS Web</h2>
+                        <a href="https://github.com/braingeneers/sims-web" target="_blank"
+                            aria-label="View source on GitHub">
+                            <i class="bi bi-github" style="font-size: 1.5rem; color: black;"></i>
+                        </a>
+                    </div>
                     <div class="form-group mb-3">
                         <label for="model_select">Select a model:</label>
                         <select class="form-control" id="model_select">

main.js

@@ -157,8 +157,8 @@ async function main() {
       return file;
     }
 
-    const fileUrl = "http://localhost:3000/data/default.h5ad"; // Replace with actual file URL
-    const fileName = "default.h5ad"; // Replace with desired file name
+    const fileUrl = "http://localhost:3000/sample.h5ad"; // Replace with actual file URL
+    const fileName = "sample.h5ad"; // Replace with desired file name
 
     try {
       const file = await urlToFile(fileUrl, fileName);

models/default.classes

@@ -0,0 +1,8 @@
+Cycling
+IPCs
+Immature CPNs
+Immature Interneurons
+Immature PNs
+RG
+Ventral Precursors
+oRG/Astroglia